RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 OOSP2Q86WS3 158 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 DND1Q8IYX4 353 aaKnown RBP17.16■□□□□ 0.34
PMPCB-204ENST00000444457 FRMD1Q8N878 549 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 POMGNT2Q8NAT1 580 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 ZMYND19Q96E35 227 aaPredicted RBP17.16■□□□□ 0.34
PMPCB-204ENST00000444457 CNN2Q99439 309 aaKnown RBP17.16■□□□□ 0.34
PMPCB-204ENST00000444457 ZNF426Q9BUY5 554 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 BCL2L14Q9BZR8 327 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 EXO5Q9H790 373 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 DNAJB12Q9NXW2 375 aaKnown RBP17.16■□□□□ 0.34
PMPCB-204ENST00000444457 ZNF281Q9Y2X9 895 aa17.16■□□□□ 0.34
PMPCB-204ENST00000444457 A0A1B0GTI1 187 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 ACTL6AO96019 429 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 NGFRP08138 427 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 AKAIN1P0CW23 69 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 FOLR2P14207 255 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 ST6GAL1P15907 406 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 S1PR1P21453 382 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 PSMB10P40306 273 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 ACAA2P42765 397 aaKnown RBP17.15■□□□□ 0.34
PMPCB-204ENST00000444457 GGTLC2Q14390 218 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 C11orf87Q6NUJ2 197 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 SLC35F2Q8IXU6 374 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 SDR9C7Q8NEX9 313 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 RGP1Q92546 391 aaPredicted RBP17.15■□□□□ 0.34
PMPCB-204ENST00000444457 LMF2Q9BU23 707 aaKnown RBP17.15■□□□□ 0.34
PMPCB-204ENST00000444457 MSRAQ9UJ68 235 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 IMPA2O14732 288 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 IGKV1D-16P01601 117 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 ITGB2P05107 769 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 MELTFP08582 738 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 SPI1P17947 270 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 SNRPEP62304 92 aaKnown RBP17.15■□□□□ 0.34
PMPCB-204ENST00000444457 C5orf46Q6UWT4 87 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 TAF8Q7Z7C8 310 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 OR4N2Q8NGD1 307 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 ARL5BQ96KC2 179 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 TNFRSF13CQ96RJ3 184 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 RNF122Q9H9V4 155 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 C2orf42Q9NWW7 574 aa17.15■□□□□ 0.34
PMPCB-204ENST00000444457 TMEM200CA6NKL6 621 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 PRAMEF26H0Y7S4 382 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 GATCO43716 136 aaKnown RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 IGHV4-34P06331 123 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 RBM34P42696 430 aaKnown RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 MAGEB1P43366 347 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 FHL1Q13642 323 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 HABP2Q14520 560 aaPredicted RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 ZNHIT3Q15649 155 aaPredicted RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 ALG10BQ5I7T1 473 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 RAB12Q6IQ22 244 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 TMEM71Q6P5X7 295 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 RBMS3Q6XE24 437 aaKnown RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 STAC2Q6ZMT1 411 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 ARHGEF39Q8N4T4 335 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 STEAP2Q8NFT2 490 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 OR5M8Q8NGP6 311 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 OR1J4Q8NGS1 313 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 CCDC107Q8WV48 283 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 MRPL48Q96GC5 212 aaKnown RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 SEC11CQ9BY50 192 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 TRIM2Q9C040 744 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 TINAGL1Q9GZM7 467 aaPredicted RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 OR51M1Q9H341 326 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 POFUT1Q9H488 388 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 FKRPQ9H9S5 495 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 LHX6Q9UPM6 363 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 OR6C76A6NM76 312 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 C10orf142B7Z368 130 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 OR4E1P0C645 316 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 CSF2RBP32927 897 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 NAA10P41227 235 aaPredicted RBP17.14■□□□□ 0.33
PMPCB-204ENST00000444457 PNLIPRP2P54317 469 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 HHEXQ03014 270 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 ACOT7LQ6ZUV0 252 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 NCDNQ9UBB6 729 aa17.14■□□□□ 0.33
PMPCB-204ENST00000444457 UBE2CO00762 179 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 F12P00748 615 aaPredicted RBP17.13■□□□□ 0.33
PMPCB-204ENST00000444457 IFNGP01579 166 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 S100A6P06703 90 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 GTF2F2P13984 249 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 ABOP16442 354 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 SLC6A6P31641 620 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 RAB5BP61020 215 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 LTBQ06643 244 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 SRSF5Q13243 272 aaKnown RBP17.13■□□□□ 0.33
PMPCB-204ENST00000444457 LIN54Q6MZP7 749 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 ARHGAP11AQ6P4F7 1023 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 MAMSTRQ6ZN01 415 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 SEMA6CQ9H3T2 930 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 SEBOXQ9HB31 216 aaPredicted RBP17.13■□□□□ 0.33
PMPCB-204ENST00000444457 NIT2Q9NQR4 276 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 SPTBP11277 2137 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 C5orf52A6NGY3 159 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 NUDT19A8MXV4 375 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 TGFBR3LH3BV60 316 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 GUSBP08236 651 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 ADRA2CP18825 462 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 DLSTP36957 453 aa17.13■□□□□ 0.33
PMPCB-204ENST00000444457 LPCAT3Q6P1A2 487 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms