RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 KCNK17Q96T54 332 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 ALG12Q9BV10 488 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 NDEL1Q9GZM8 345 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 OR51B6Q9H340 312 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 MS4A5Q9H3V2 200 aa17.29■□□□□ 0.36
LRCH3-208ENST00000443727 NMNAT1Q9HAN9 279 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-208ENST00000443727 ZNF346Q9UL40 294 aaKnown RBP17.29■□□□□ 0.36
LRCH3-208ENST00000443727 A0A087WUU8 490 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 APEHP13798 732 aaKnown RBP17.28■□□□□ 0.36
LRCH3-208ENST00000443727 APLNRP35414 380 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 ALDH3B1P43353 468 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 GZMKP49863 264 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 MSMPQ1L6U9 139 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 THEM4Q5T1C6 240 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 RGS7BPQ6MZT1 257 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-208ENST00000443727 RNF148Q8N7C7 305 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 FNDC8Q8TC99 324 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 UBASH3BQ8TF42 649 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 SAMD4AQ9UPU9 718 aaKnown RBP17.28■□□□□ 0.36
LRCH3-208ENST00000443727 TMEM5Q9Y2B1 443 aa17.28■□□□□ 0.36
LRCH3-208ENST00000443727 KIAA1324LA8MWY0 1029 aaPredicted RBP17.27■□□□□ 0.36
LRCH3-208ENST00000443727 PRSS23O95084 383 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 STAMBPO95630 424 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 IGHMP01871 453 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 LCKP06239 509 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 H1F0P07305 194 aaKnown RBP17.27■□□□□ 0.36
LRCH3-208ENST00000443727 IGHV4-31P0DP07 118 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 TCN1P20061 433 aaPredicted RBP17.27■□□□□ 0.36
LRCH3-208ENST00000443727 CCNOP22674 350 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 GYS2P54840 703 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 GNGT1P63211 74 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 KRT72Q14CN4 511 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 CHRFAM7AQ494W8 412 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 FGD3Q5JSP0 725 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 LRP11Q86VZ4 500 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 HIPK1Q86Z02 1210 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 PAQR4Q8N4S7 273 aaPredicted RBP17.27■□□□□ 0.36
LRCH3-208ENST00000443727 ICA1LQ8NDH6 482 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 NMD3Q96D46 503 aaKnown RBP17.27■□□□□ 0.36
LRCH3-208ENST00000443727 TSPAN32Q96QS1 320 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 BPESC1Q9GZL8 116 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 ANKRD19PQ9H560 264 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 GRHPRQ9UBQ7 328 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 ADAM21Q9UKJ8 722 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 UGT2A1Q9Y4X1 527 aa17.27■□□□□ 0.36
LRCH3-208ENST00000443727 IGKV1D-43A0A0B4J1Z2 117 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 IGHV4-61A0A0C4DH41 118 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 A0A1W2PPL8 197 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF16P17020 682 aaPredicted RBP17.26■□□□□ 0.35
LRCH3-208ENST00000443727 APEX1P27695 318 aaKnown RBP17.26■□□□□ 0.35
LRCH3-208ENST00000443727 RAD52P43351 418 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 ERVK-25P63136 954 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 MAD2L1BPQ15013 274 aaPredicted RBP17.26■□□□□ 0.35
LRCH3-208ENST00000443727 NKPD1Q17RQ9 610 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 ZBED5Q49AG3 693 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 PABPC1L2AQ5JQF8 200 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 SLC25A47Q6Q0C1 308 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 TMPRSS11FQ6ZWK6 438 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF786Q8N393 782 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 CLDN22Q8N7P3 220 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 LRRC75AQ8NAA5 344 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 C11orf40Q8WZ69 217 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 DCAF13Q9NV06 445 aaKnown RBP17.26■□□□□ 0.35
LRCH3-208ENST00000443727 GPR160Q9UJ42 338 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 V9GYQ6 96 aa17.26■□□□□ 0.35
LRCH3-208ENST00000443727 XKRYO14609 159 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 SNAP29O95721 258 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 MMP7P09237 267 aaPredicted RBP17.25■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF32P17041 273 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 RHCEP18577 417 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 STOMP27105 288 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 GIFP27352 417 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 PODNL1Q6PEZ8 512 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 ARIH2OSQ8N7S6 290 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 FAM156AQ8NDB6 213 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF519Q8TB69 540 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 SLC7A13Q8TCU3 470 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 NABP1Q96AH0 204 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 FAM46AQ96IP4 442 aaKnown RBP17.25■□□□□ 0.35
LRCH3-208ENST00000443727 LRRC37BQ96QE4 947 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 BCL2L14Q9BZR8 327 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 KRCC1Q9NPI7 259 aaPredicted RBP17.25■□□□□ 0.35
LRCH3-208ENST00000443727 NDUFAF4Q9P032 175 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 MYEF2Q9P2K5 600 aaKnown RBP17.25■□□□□ 0.35
LRCH3-208ENST00000443727 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 RTTNQ86VV8 2226 aa17.25■□□□□ 0.35
LRCH3-208ENST00000443727 CHD3Q12873 2000 aaKnown RBP17.25■□□□□ 0.35
LRCH3-208ENST00000443727 LOC100289279A0A1B0GTE1 492 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 A0A1W2PRQ8 180 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 CDC42EP2O14613 210 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 IFNA2P01563 188 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 CD14P08571 375 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 IGFBP1P08833 259 aaPredicted RBP17.24■□□□□ 0.35
LRCH3-208ENST00000443727 ZNF23P17027 643 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 ITGA2P17301 1181 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 LAP3P28838 519 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 GDI2P50395 445 aaKnown RBP17.24■□□□□ 0.35
LRCH3-208ENST00000443727 UCP2P55851 309 aa17.24■□□□□ 0.35
LRCH3-208ENST00000443727 KLF3P57682 345 aaPredicted RBP17.24■□□□□ 0.35
LRCH3-208ENST00000443727 PCBD1P61457 104 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms