RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SEH1LQ96EE3 360 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ELOA3CA0A087WX78 387 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 LOC390937A0A1W2PQ73 354 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 A0A1W2PR48 441 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 OR10H2O60403 315 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CTAG2O75638 210 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TMIGD3P0DMS9 266 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 FOSL2P15408 326 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 HTR5AP47898 357 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ARRB1P49407 418 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 CLDN6P56747 220 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 DCDP81605 110 aaKnown RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 REEP5Q00765 189 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF813Q6ZN06 617 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 VOPP1Q96AW1 172 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 C20orf141Q9NUB4 165 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SPTAN1Q13813 2472 aaKnown RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 LEFTY1O75610 366 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 EOMESO95936 686 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SPOCK1Q08629 439 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 LBHQ53QV2 105 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 FAM24BQ8N5W8 94 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 MS4A4AQ96JQ5 239 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TAAR9Q96RI9 348 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ADAM19Q9H013 955 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF700Q9H0M5 742 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 PRSS16Q9NQE7 514 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TMEM14AQ9Y6G1 99 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ASXL3Q9C0F0 2248 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 MFNGO00587 321 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TXNDC12O95881 172 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 RELQ04864 619 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF805Q5CZA5 627 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TRAPPC6BQ86SZ2 158 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SLC43A2Q8N370 569 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ISOC2Q96AB3 205 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 FBXO4Q9UKT5 387 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 C14orf166Q9Y224 244 aaKnown RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 FLVCR1Q9Y5Y0 555 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 B4GALT2O60909 372 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 THBS1P07996 1170 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 FUT1P19526 365 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF10P21506 573 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 HIST1H1TP22492 207 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 CX3CR1P49238 355 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ITPRIPL2Q3MIP1 535 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 NCMAPQ5T1S8 102 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 MDGA2Q7Z553 956 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SMIM3Q9BZL3 60 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 C1orf198Q9H425 327 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TRAV14DV4A0A0A6YYC5 116 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 A0A1B0GWA3 101 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 AHSA1O95433 338 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 RENP00797 406 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 FABP4P15090 132 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 PPP1R1AQ13522 171 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 LEG1Q6P5S2 330 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TGIF2LXQ8IUE1 241 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF679Q8IYX0 411 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 MR1Q95460 341 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 OR11A1Q9GZK7 315 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 IL21RQ9HBE5 538 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZMIZ1Q9ULJ6 1067 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 DTX4Q9Y2E6 619 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 URGCP-MRPS24S4R325 110 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 USF3Q68DE3 2245 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 IDSB3KWA1 339 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 AGAP20933 346 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF239Q16600 458 aaKnown RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 UNQ9370/PRO34162Q6UXP9 181 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 FGF11Q92914 225 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 NMNAT3Q96T66 252 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SEMA6CQ9H3T2 930 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 EPHX3Q9H6B9 360 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 TAF9BQ9HBM6 251 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 KCNK6Q9Y257 313 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CACNA1BQ00975 2339 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 OR52A4PA6NMU1 304 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 BLOC1S5-TXNDC5H3BN57 136 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ITGB2P05107 769 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 PMPCAQ10713 525 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNHIT3Q15649 155 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 AWAT1Q58HT5 328 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 KLHDC8AQ8IYD2 350 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SLC17A9Q9BYT1 436 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 VSX1Q9NZR4 365 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 VSIG4Q9Y279 399 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 SERPINA5P05154 406 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CRHP06850 196 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 MAP2K5Q13163 448 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 LRRC25Q8N386 305 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 ZNF283Q8N7M2 679 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 OR5H2Q8NGV7 314 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 ADAP2Q9NPF8 381 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CXXC1Q9P0U4 656 aaPredicted RBP4.58□□□□□ -1.68
HERC1-201ENST00000443617 SLC23A2Q9UGH3 650 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CACFD1Q9UGQ2 172 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 DOPEY2Q9Y3R5 2298 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CD70P32970 193 aa4.58□□□□□ -1.68
HERC1-201ENST00000443617 CLDN2P57739 230 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms