RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 CDK5Q00535 292 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 CDKN3Q16667 212 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 GLYATL3Q5SZD4 288 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 HSD11B1LQ7Z5J1 315 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 OR51A4Q8NGJ6 313 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 OR13C8Q8NGS7 320 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SCARB1Q8WTV0 552 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 EDAQ92838 391 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 TSLPQ969D9 159 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 C10orf90Q96M02 699 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 TECTBQ96PL2 329 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PCYT2Q99447 389 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 LYRM4Q9HD34 91 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PSORS1C1Q9UIG5 152 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 GABRQQ9UN88 632 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 TMED7-TICAM2A0A0A6YYA0 188 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 IGKV6-21A0A0C4DH24 114 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 EIF4E2O60573 245 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 ATP1B1P05026 303 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SLC35E2P0CK97 266 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 CCR9P51686 369 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 CLDN2P57739 230 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 UBE2IP63279 158 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 CLINT1Q14677 625 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 OTUD1Q5VV17 481 aaPredicted RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 H1FNTQ75WM6 255 aaPredicted RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 TSEN54Q7Z6J9 526 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 SYT9Q86SS6 491 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PGBD5Q8N414 524 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SCCPDHQ8NBX0 429 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 QRSL1Q9H0R6 528 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 CALHM2Q9HA72 323 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 CREBZFQ9NS37 354 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 RNF186Q9NXI6 227 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 TMED7Q9Y3B3 224 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 MCM3APO60318 1980 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 ABCD4O14678 606 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SSTR2P30874 369 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SOX18P35713 384 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PITX1P78337 314 aaPredicted RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 C18orf21Q32NC0 220 aaPredicted RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 ZNF628Q5EBL2 1059 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 ADAMTSL4Q6UY14 1074 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 LHFPL2Q6ZUX7 228 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 TMEM217Q8N7C4 229 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SUMF1Q8NBK3 374 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 OR13C9Q8NGT0 318 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 C12orf10Q9HB07 376 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 DUSP13Q9UII6 198 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SH3BGRL2Q9UJC5 107 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 B3GALT5Q9Y2C3 310 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 A0A1B0GUL6 1792 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PRAMEF25A6NGN4 478 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 OR6C76A6NM76 312 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 H7BYZ3 331 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PRRG2O14669 202 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 NUPL2O15504 423 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 CYTIPO60759 359 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PAPLNO95428 1278 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 LY86O95711 162 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SNRPGP62308 76 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 THEM4Q5T1C6 240 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PRAMEF5Q5TYX0 476 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PRAMEF6Q5VXH4 476 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 OR8G2PQ6IF36 304 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PLXDC2Q6UX71 529 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 MRPL43Q8N983 215 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 FBXW5Q969U6 566 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 SORT1Q99523 831 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 UQCC2Q9BRT2 126 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 PRSS16Q9NQE7 514 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 NDRG3Q9UGV2 375 aa6.16□□□□□ -1.42
USP46-201ENST00000441222 DIMT1Q9UNQ2 313 aaKnown RBP6.16□□□□□ -1.42
USP46-201ENST00000441222 ANKRD31Q8N7Z5 1873 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 OR6C68A6NDL8 312 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 FURINP09958 794 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 HCCSP53701 268 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 PTTG1IPP53801 180 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 IHHQ14623 411 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 ARHGAP11BQ3KRB8 267 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 LSRQ86X29 649 aaPredicted RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 ZNF296Q8WUU4 475 aaPredicted RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 MED30Q96HR3 178 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 CPPED1Q9BRF8 314 aaPredicted RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 VPS25Q9BRG1 176 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 HDAC8Q9BY41 377 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 GAB2Q9UQC2 676 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 MN1Q10571 1320 aaPredicted RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 GASTP01350 101 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 RFC3P40938 356 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 MRPL19P49406 292 aaKnown RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 DND1Q8IYX4 353 aaKnown RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 OR5H6Q8NGV6 325 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 OR10Z1Q8NGY1 313 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 GOT1L1Q8NHS2 421 aaPredicted RBP6.15□□□□□ -1.42
USP46-201ENST00000441222 EDARADDQ8WWZ3 215 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 FGF13Q92913 245 aa6.15□□□□□ -1.42
USP46-201ENST00000441222 UTP4Q969X6 686 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms