RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ZNF582Q96NG8 517 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 OPALINQ96PE5 141 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF385AQ96PM9 386 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 STACQ99469 402 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SDF2Q99470 211 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPA33Q99795 319 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCDC3Q9BQI4 270 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ABHD6Q9BV23 337 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TAPBPLQ9BX59 468 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPR174Q9BXC1 333 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MROQ9BYG7 248 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PLA2G12AQ9BZM1 189 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 C6orf62Q9GZU0 229 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF350Q9GZX5 532 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ESRP2Q9H6T0 727 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 EGLN3Q9H6Z9 239 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ANKRA2Q9H9E1 313 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SIAEQ9HAT2 523 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZBTB20Q9HC78 741 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 HHATLQ9HCP6 504 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FGF20Q9NP95 211 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 EXOSC4Q9NPD3 245 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ADAP2Q9NPF8 381 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ISYNA1Q9NPH2 558 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MKKSQ9NPJ1 570 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 POLE3Q9NRF9 147 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MED17Q9NVC6 651 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TAS2R16Q9NYV7 291 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 NLGN3Q9NZ94 848 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MDFICQ9P1T7 246 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SEC14L4Q9UDX3 406 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CLEC2DQ9UHP7 191 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 STUB1Q9UNE7 303 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SSR3Q9UNL2 185 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SATB2Q9UPW6 733 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 CFL2Q9Y281 166 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF443Q9Y2A4 671 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 LSM2Q9Y333 95 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 MRPS2Q9Y399 296 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 EXOSC1Q9Y3B2 195 aaKnown RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 WDR45Q9Y484 360 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 UGT2A1Q9Y4X1 527 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 DOCK6Q96HP0 2047 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 TCF20Q9UGU0 1960 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 LRRK1Q38SD2 2015 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PIKFYVEQ9Y2I7 2098 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A087WV48 116 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A0B4J293 547 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM129A0AVI4 362 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 HYKKA2RU49 373 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRAPPC13A5PLN9 417 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC9B1P1A6NJY1 282 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SHISA7A6NL88 538 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF670-ZNF695F2Z2N8 137 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SGK494L7N484 410 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SURF4O15260 269 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CHST10O43529 356 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR10H2O60403 315 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF217O75362 1048 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 UPK1BO75841 260 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RCBTB2O95199 551 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SNX4O95219 450 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PPP1R3DO95685 299 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CH25HO95992 272 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 THY1P04216 161 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CYC1P08574 325 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CT62P0C5K7 136 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TSPAN19P0C672 248 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC35E2P0CK97 266 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 GNSP15586 552 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RPS4Y1P22090 263 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDH3P22223 829 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACHEP22303 614 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CHATP28329 748 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 GABRA3P34903 492 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ETV5P41161 510 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ETV6P41212 452 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CRYBB2P43320 205 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ETV1P50549 477 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RORCP51449 518 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF136P52737 540 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDH11P55287 796 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 WNT4P56705 351 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 VSX2P58304 361 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 COPZ1P61923 177 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SKP1P63208 163 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 SIRPAP78324 504 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 HOXC5Q00444 222 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 IFITM3Q01628 133 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 BNC1Q01954 994 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 RUNX1T1Q06455 604 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 CDC20Q12834 499 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 STX4Q12846 297 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 C1orf61Q13536 156 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 KRR1Q13601 381 aaKnown RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 TPBGQ13641 420 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR1Q1Q15612 314 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNHIT3Q15649 155 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAPK14Q16539 360 aa3.07□□□□□ -1.92
HMGB3P11-201ENST00000440127 PNLIPRP3Q17RR3 467 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms