RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SNX29P2Q8IUI4 249 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 GHDCQ8N2G8 530 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CELF2-AS1Q8N7Q2 184 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 OR4F15Q8NGB8 312 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ABHD4Q8TB40 342 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ZFAND1Q8TCF1 268 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CNOT9Q92600 299 aaKnown RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NSMAFQ92636 917 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RFT1Q96AA3 541 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ZG16BQ96DA0 208 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 RNF170Q96K19 258 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 PGLYRP3Q96LB9 341 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 DDOQ99489 341 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 IFT27Q9BW83 186 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 QRSL1Q9H0R6 528 aaKnown RBP4.28□□□□□ -1.72
EDEM3-203ENST00000439962 TMEM185BQ9H7F4 350 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 NRIP3Q9NQ35 241 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 ST6GALNAC2Q9UJ37 374 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CARD8Q9Y2G2 431 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 HIF3AQ9Y2N7 669 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 N6AMT1Q9Y5N5 214 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 CADP27708 2225 aa4.28□□□□□ -1.72
EDEM3-203ENST00000439962 LOC102723996A0A087X1L8 192 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 IGKV3D-11A0A0A0MRZ8 115 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM200CA6NKL6 621 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 OR6C76A6NM76 312 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 CCL21O00585 134 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 TO15178 435 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 PIP5K1CO60331 668 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 DHFRP00374 187 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 LALBAP00709 142 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 P04436 131 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 SP1P08047 785 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 UBL4AP11441 157 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 RAB3BP20337 219 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 CAPZA1P52907 286 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 DLX5P56178 289 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 AP3S2P59780 193 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 PPIAP62937 165 aaKnown RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF85Q03923 595 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 SSBP1Q04837 148 aaKnown RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 CRMP1Q14194 572 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 TBRG1Q3YBR2 411 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 KLHL26Q53HC5 615 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 ALG10BQ5I7T1 473 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 UBE2NLQ5JXB2 153 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 CD276Q5ZPR3 534 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 SLC25A25Q6KCM7 469 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 SFXN4Q6P4A7 337 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 FDX2Q6P4F2 183 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 LRRN1Q6UXK5 716 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF767PQ75MW2 155 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 BCDIN3DQ7Z5W3 292 aaKnown RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 YRDCQ86U90 279 aaKnown RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 LHFPL3Q86UP9 236 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 BCORP1Q8N888 145 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 ASCC1Q8N9N2 400 aaKnown RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 NFAM1Q8NET5 270 aaPredicted RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 OR51G2Q8NGK0 314 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 ELP5Q8TE02 316 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 ZNF721Q8TF20 911 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 RAB40AQ8WXH6 277 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 PTP4A1Q93096 173 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 HYLS1Q96M11 299 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 OR2M2Q96R28 347 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 PRR14Q9BWN1 585 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 METTL7AQ9H8H3 244 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 MARCH7Q9H992 704 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 MCCC2Q9HCC0 563 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 EMC7Q9NPA0 242 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 MMP25Q9NPA2 562 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 MEPEQ9NQ76 525 aaPredicted RBP4.28□□□□□ -1.73
EDEM3-203ENST00000439962 C14orf119Q9NWQ9 140 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 MCUBQ9NWR8 336 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 KCNE5Q9UJ90 142 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 SPATA2Q9UM82 520 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 GPR52Q9Y2T5 361 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 LIPGQ9Y5X9 500 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 TMEM14AQ9Y6G1 99 aa4.28□□□□□ -1.73
EDEM3-203ENST00000439962 A0A0G2JK05 382 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 A0A1B0GVI7 797 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FAM240BA0A1B0GVZ2 78 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FRG2CA6NGY1 282 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 SERINC4A6NH21 518 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 NPIPB13A6NJU9 1138 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 NPIPB4C9JG80 1138 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 EIF4E2O60573 245 aaKnown RBP4.27□□□□□ -1.73
EDEM3-203ENST00000439962 HPGDSO60760 199 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 FZD7O75084 574 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CEACAM4O75871 244 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 GLCEO94923 617 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 IL33O95760 270 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 NUDT14O95848 222 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 MT-ATP6P00846 226 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PTNP21246 168 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 AHCYP23526 432 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 GDF1P27539 372 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 KIR2DL3P43628 341 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 PPICP45877 212 aa4.27□□□□□ -1.73
EDEM3-203ENST00000439962 CCR4P51679 360 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms