RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ZNF616Q08AN1 781 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 MRPL2Q5T653 305 aaKnown RBP14.42□□□□□ -0.1
DHFR-201ENST00000439211 ABHD13Q7L211 337 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 MEPCEQ7L2J0 689 aaKnown RBP14.42□□□□□ -0.1
DHFR-201ENST00000439211 OOSP2Q86WS3 158 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 ARRDC1Q8N5I2 433 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 KCNRGQ8N5I3 272 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 SYT4Q9H2B2 425 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 SIRT7Q9NRC8 400 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 MMP26Q9NRE1 261 aa14.42□□□□□ -0.1
DHFR-201ENST00000439211 RP1L1Q8IWN7 2480 aaPredicted RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 SLC22A31A6NKX4 558 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 SULT2B1O00204 365 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 PHYHIPLQ96FC7 376 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 C1QTNF2Q9BXJ5 285 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 PARP12Q9H0J9 701 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 BRWD1Q9NSI6 2320 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 FAM171A2A8MVW0 826 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 DCTN6O00399 190 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 CDC42EP2O14613 210 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 KCNAB3O43448 404 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 HLA-AP01891 365 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 AMY2AP04746 511 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 CLUP10909 449 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 ZNHIT3Q15649 155 aaPredicted RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 BATFQ16520 125 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 DUSP5Q16690 384 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 TRMT12Q53H54 448 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 ADAMTSL4Q6UY14 1074 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 GLB1L2Q8IW92 636 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 CCDC54Q8NEL0 328 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 C15orf40Q8WUR7 153 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 TSACCQ96A04 125 aaPredicted RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 CARHSP1Q9Y2V2 147 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 PLXNA4Q9HCM2 1894 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 CXorf51AA0A1B0GTR3 108 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 GRXCR1A8MXD5 290 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 PRH1P02810 166 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 ZNF84P51523 738 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 CRMP1Q14194 572 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 OR1Q1Q15612 314 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 POMZP3Q6PJE2 187 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 TMPRSS12Q86WS5 348 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 SFXN5Q8TD22 340 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 APOBEC4Q8WW27 367 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 BADQ92934 168 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 MRPL38Q96DV4 380 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 ZNF649Q9BS31 505 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 OPN3Q9H1Y3 402 aaPredicted RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 POFUT1Q9H488 388 aa14.41□□□□□ -0.1
DHFR-201ENST00000439211 APOBEC3BQ9UH17 382 aaKnown RBP14.41□□□□□ -0.1
DHFR-201ENST00000439211 TRAV18A0A075B6X5 111 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 ACOD1A6NK06 481 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 PEX12O00623 359 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 AGR2O95994 175 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 RGS19P49795 217 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SHC2P98077 582 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 C11orf87Q6NUJ2 197 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SPRED2Q7Z698 418 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SDR9C7Q8NEX9 313 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 OR4C16Q8NGL9 310 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 FGF13Q92913 245 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SMARCD2Q92925 531 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 ZBTB8AQ96BR9 441 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 LCORQ96JN0 433 aaPredicted RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 RSPO3Q9BXY4 272 aaPredicted RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 POTEKPQ9BYX7 375 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SPACA1Q9HBV2 294 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 PUS1Q9Y606 427 aaKnown RBP eCLIP14.4□□□□□ -0.13e-6■□□□□ 9.1
DHFR-201ENST00000439211 HEATR5BQ9P2D3 2071 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 ANAPC1Q9H1A4 1944 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SPINT1O43278 529 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 TSPAN15O95858 294 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 F10P00742 488 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 MUC1P15941 1255 aaPredicted RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 ITPKBP27987 946 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 MLF2Q15773 248 aaPredicted RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 DECR1Q16698 335 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 TMEM52BQ4KMG9 183 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 AWAT1Q58HT5 328 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 ARMC6Q6NXE6 501 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 MFSD8Q8NHS3 518 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 DIO2Q92813 273 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 SLC17A9Q9BYT1 436 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 PRDM7Q9NQW5 492 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 GDF2Q9UK05 429 aaPredicted RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 C7orf77A4D0Y5 90 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 E9PQ18 207 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 HNRNPA1P09651 372 aaKnown RBP eCLIP14.4□□□□□ -0.1
DHFR-201ENST00000439211 PGAM2P15259 253 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 MAOAP21397 527 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 PSMB10P40306 273 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 P2RX1P51575 399 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 MECP2P51608 486 aaKnown RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 MFSD12Q6NUT3 480 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 TMEM64Q6YI46 380 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 FOXRED1Q96CU9 486 aaPredicted RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 THOC3Q96J01 351 aaKnown RBP14.4□□□□□ -0.1
DHFR-201ENST00000439211 PTCHD1Q96NR3 888 aa14.4□□□□□ -0.1
DHFR-201ENST00000439211 WDR13Q9H1Z4 485 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms