RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 RAF1P04049 648 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 HRGP04196 525 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 CCL3P10147 92 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 P2RY4P51582 365 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 PCK2Q16822 640 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 LRRC69Q6ZNQ3 347 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 SLC26A10Q8NG04 563 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 TXNDC15Q96J42 360 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 SGCZQ96LD1 299 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 PROK2Q9HC23 129 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 MED29Q9NX70 200 aa23■■□□□ 1.27
CPNE1-216ENST00000437340 MT-CO3P00414 261 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 PAHP00439 452 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 CD97P48960 835 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 DSCR4P56555 118 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-216ENST00000437340 OR2B6P58173 313 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 ZNF544Q6NX49 715 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 HDDC2Q7Z4H3 204 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 SYT9Q86SS6 491 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 UEVLDQ8IX04 471 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 ZNF676Q8N7Q3 588 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 OR4M1Q8NGD0 313 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 FOXN4Q96NZ1 517 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 OR5B2Q96R09 309 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 SLITRK2Q9H156 845 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 KLHL9Q9P2J3 617 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 SPATA2Q9UM82 520 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 LIFP15018 202 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 ZNF823P16415 610 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 OTX2P32243 289 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 PITPNBP48739 271 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 EIF2B1Q14232 305 aaKnown RBP22.99■■□□□ 1.27
CPNE1-216ENST00000437340 LRRN1Q6UXK5 716 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 OR5M1Q8NGP8 315 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 GPR148Q8TDV2 347 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 CHAC2Q8WUX2 184 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 ABHD6Q9BV23 337 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 C11orf54Q9H0W9 315 aaPredicted RBP22.99■■□□□ 1.27
CPNE1-216ENST00000437340 TMEM185BQ9H7F4 350 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 SACM1LQ9NTJ5 587 aa22.99■■□□□ 1.27
CPNE1-216ENST00000437340 LOC102725191A0A1B0GVB3 256 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 PLA2G10O15496 165 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 AQP8O94778 261 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 DPP4P27487 766 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 BIDP55957 195 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 RPS18P62269 152 aaKnown RBP22.98■■□□□ 1.27
CPNE1-216ENST00000437340 C19orf57Q0VDD7 668 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 MADCAM1Q13477 382 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 KRT77Q7Z794 578 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 PRSS35Q8N3Z0 413 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 IL17RDQ8NFM7 739 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 OR1J4Q8NGS1 313 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 OR52N5Q8NH56 324 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 MIB2Q96AX9 1013 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 TMEM41AQ96HV5 264 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 RBP7Q96R05 134 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 MRI1Q9BV20 369 aa22.98■■□□□ 1.27
CPNE1-216ENST00000437340 MRPL13Q9BYD1 178 aaKnown RBP22.98■■□□□ 1.27
CPNE1-216ENST00000437340 A0A0G2JMP0 313 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 A0A0X1KG70 313 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 AIPO00170 330 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 GPR171O14626 319 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 TCEA1P23193 301 aaKnown RBP22.97■■□□□ 1.27
CPNE1-216ENST00000437340 RIDAP52758 137 aaKnown RBP22.97■■□□□ 1.27
CPNE1-216ENST00000437340 RPS15P62841 145 aaKnown RBP22.97■■□□□ 1.27
CPNE1-216ENST00000437340 SLC35A1P78382 337 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 FOXK1P85037 733 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 FMODQ06828 376 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 EIF3IQ13347 325 aaKnown RBP22.97■■□□□ 1.27
CPNE1-216ENST00000437340 TMEM176BQ3YBM2 270 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-216ENST00000437340 HES3Q5TGS1 186 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 PYHIN1Q6K0P9 492 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.97■■□□□ 1.27
CPNE1-216ENST00000437340 CELF2-AS1Q8N7Q2 184 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 OR4M2Q8NGB6 313 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 OXGR1Q96P68 337 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 TCF7L1Q9HCS4 588 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 BRD7Q9NPI1 651 aa22.97■■□□□ 1.27
CPNE1-216ENST00000437340 TRBV5-7A0A0A0MS05 114 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 A0A1W2PNR3 127 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 PROB1E7EW31 1015 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 KIR3DL2P43630 455 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 WDR38Q5JTN6 314 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 THEM4Q5T1C6 240 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 H3F3CQ6NXT2 135 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 WDFY1Q8IWB7 410 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 OR5H6Q8NGV6 325 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 ADAMTS14Q8WXS8 1223 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 GFI1Q99684 422 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 V9GY05 133 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 ZFHX2Q9C0A1 2572 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-216ENST00000437340 A0A1B0GTH9 108 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 LINC00854A0A1B0GVQ3 168 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 A0A1W2PNU3 283 aaPredicted RBP22.96■■□□□ 1.27
CPNE1-216ENST00000437340 IFITM5A6NNB3 132 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 C9orf172C9J069 976 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 PMS2P2O95744 297 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 SNRPBP14678 240 aaKnown RBP22.96■■□□□ 1.27
CPNE1-216ENST00000437340 NR4A2P43354 598 aa22.96■■□□□ 1.27
CPNE1-216ENST00000437340 TIGD3Q6B0B8 471 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms