RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 CD47Q08722 323 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 ZP4Q12836 540 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 DUSP7Q16829 419 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 MSMPQ1L6U9 139 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 HFEQ30201 348 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 NRN1LQ496H8 165 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 FAM209AQ5JX71 171 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 AVPI1Q5T686 147 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 ACSM5Q6NUN0 579 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 DEF8Q6ZN54 512 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 PEG10Q86TG7 708 aaKnown RBP6.64□□□□□ -1.35
VPS50-203ENST00000436177 LRP11Q86VZ4 500 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 C10orf111Q8N326 155 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 BPIFB2Q8N4F0 458 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.64□□□□□ -1.35
VPS50-203ENST00000436177 C3orf56Q8N813 242 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 SYT14Q8NB59 555 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 GCDHQ92947 438 aaPredicted RBP6.64□□□□□ -1.35
VPS50-203ENST00000436177 ZMYND19Q96E35 227 aaPredicted RBP6.64□□□□□ -1.35
VPS50-203ENST00000436177 ARHGDIGQ99819 225 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 SH3GL1Q99961 368 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 GAL3ST1Q99999 423 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 EGLN1Q9GZT9 426 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 ZNF665Q9H7R5 613 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 INIPQ9NRY2 104 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 INTS9Q9NV88 658 aaKnown RBP6.64□□□□□ -1.35
VPS50-203ENST00000436177 ZNF224Q9NZL3 707 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 MYEF2Q9P2K5 600 aaKnown RBP6.64□□□□□ -1.35
VPS50-203ENST00000436177 BAG5Q9UL15 447 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 ANK2Q01484 3957 aa6.64□□□□□ -1.35
VPS50-203ENST00000436177 CENPBD1B2RD01 187 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 FAM157AC9JC47 383 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 MGRN1O60291 552 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 TPST2O60704 377 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 NCR1O76036 304 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 OR7A10O76100 309 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 F13BP05160 661 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 IGFBP1P08833 259 aaPredicted RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 PGA4P0DJD7 388 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 PGA3P0DJD8 388 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 COL8A2P25067 703 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 RBM34P42696 430 aaKnown RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 MAGEB1P43366 347 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 GDI2P50395 445 aaKnown RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 ZNF81P51508 661 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 UCP2P55851 309 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 RUNX1T1Q06455 604 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 SLC3A1Q07837 685 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 TOP3AQ13472 1001 aaPredicted RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 CYLC2Q14093 348 aaPredicted RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 RUNDC3AQ59EK9 446 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 DCAF12L2Q5VW00 463 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 LRFN4Q6PJG9 635 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 ARL9Q6T311 187 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 DLEU7Q6UYE1 221 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 RBMS3Q6XE24 437 aaKnown RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 WDR88Q6ZMY6 472 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 USP51Q70EK9 711 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 CARM1Q86X55 608 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 PTOV1Q86YD1 416 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 ALDH16A1Q8IZ83 802 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 LRRC18Q8N456 261 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 DPP10Q8N608 796 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 LRRC17Q8N6Y2 441 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 GPR32P1Q8NGA4 272 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 OR1J1Q8NGS3 322 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 YIPF5Q969M3 257 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 MCHR2Q969V1 340 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 TAMM41Q96BW9 452 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 SGTBQ96EQ0 304 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 ELMOD3Q96FG2 381 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 THOC1Q96FV9 657 aaKnown RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 ATP6V1G3Q96LB4 118 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 ECSITQ9BQ95 431 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 RBM4Q9BWF3 364 aaKnown RBP6.63□□□□□ -1.35
VPS50-203ENST00000436177 SUCNR1Q9BXA5 334 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 NDEL1Q9GZM8 345 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 MRGBPQ9NV56 204 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 NKIRAS2Q9NYR9 191 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 UBAP1Q9NZ09 502 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 PCDHB10Q9UN67 800 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 SH3GLB1Q9Y371 365 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 MED31Q9Y3C7 131 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 TENM1Q9UKZ4 2725 aa6.63□□□□□ -1.35
VPS50-203ENST00000436177 IGLV3-9A0A075B6K5 115 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 LOC105371242A0A075B767 164 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 A0A0G2JND7 137 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 C5orf49A4QMS7 147 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 J3QLI3 93 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 RP2O75695 350 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 VENTXO95231 258 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 CLPTM1O96005 669 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 MT-ND1P03886 318 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ZNF250P15622 560 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 ACADSP16219 412 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 TNFSF4P23510 183 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 GATA3P23771 443 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 FPR2P25090 351 aa6.62□□□□□ -1.35
VPS50-203ENST00000436177 STOMP27105 288 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms