RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 SETD6Q8TBK2 473 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 PHYHIPQ92561 330 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 ABHD6Q9BV23 337 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 EXTL2Q9UBQ6 330 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 MRPS18BQ9Y676 258 aaKnown RBP17.48■□□□□ 0.39
VRK2-205ENST00000432057 PCNX2A6NKB5 2137 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 A0A0B4J203 849 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 SULT2B1O00204 365 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 TRAF3IP2O43734 574 aaPredicted RBP17.48■□□□□ 0.39
VRK2-205ENST00000432057 KHDRBS3O75525 346 aaKnown RBP17.48■□□□□ 0.39
VRK2-205ENST00000432057 SERPINA7P05543 415 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 EPXP11678 715 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 EIF3IQ13347 325 aaKnown RBP17.48■□□□□ 0.39
VRK2-205ENST00000432057 ODF4Q2M2E3 257 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 H3F3CQ6NXT2 135 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 CCBE1Q6UXH8 406 aaPredicted RBP17.48■□□□□ 0.39
VRK2-205ENST00000432057 ZNF679Q8IYX0 411 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 CADM3Q8N126 398 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 PPP1R14BQ96C90 147 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 TMEM41AQ96HV5 264 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 C4orf45Q96LM5 186 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 GFI1Q99684 422 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 KLHL13Q9P2N7 655 aa17.48■□□□□ 0.39
VRK2-205ENST00000432057 OR2M5A3KFT3 312 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 CENPBD1B2RD01 187 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 H3BSH0 61 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 ZIC3O60481 467 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 APOA1P02647 267 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 HNRNPCP07910 306 aaKnown RBP eCLIP17.47■□□□□ 0.39
VRK2-205ENST00000432057 SRMP19623 302 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 SOX2P48431 317 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 SCN1BQ07699 218 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 Q499Y3 187 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 WDR38Q5JTN6 314 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 ACER2Q5QJU3 275 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 OR7E24Q6IFN5 339 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 KRT77Q7Z794 578 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 LRRC28Q86X40 367 aaPredicted RBP17.47■□□□□ 0.39
VRK2-205ENST00000432057 LINC00346Q8IVM7 164 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 ZNF676Q8N7Q3 588 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 OR4M1Q8NGD0 313 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 OR5H6Q8NGV6 325 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 OR10AC1Q8NH08 325 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 OR52N5Q8NH56 324 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 MIB2Q96AX9 1013 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 SGCZQ96LD1 299 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 COMMD4Q9H0A8 199 aa17.47■□□□□ 0.39
VRK2-205ENST00000432057 TRBV5-5A0A0J9YX44 114 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 ANKRD33BA6NCL7 494 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 AQP7P3A6NL99 342 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 BOLA2-SMG1P6H3BVE0 249 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 P04436 131 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 SNRPBP14678 240 aaKnown RBP17.46■□□□□ 0.39
VRK2-205ENST00000432057 ZNF823P16415 610 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 PTBP1P26599 531 aaKnown RBP eCLIP17.46■□□□□ 0.39
VRK2-205ENST00000432057 FKBP2P26885 142 aaKnown RBP17.46■□□□□ 0.39
VRK2-205ENST00000432057 SLC35A1P78382 337 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 ROM1Q03395 351 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 CAMK2DQ13557 499 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 KCTD18Q6PI47 426 aaPredicted RBP17.46■□□□□ 0.39
VRK2-205ENST00000432057 BEST3Q8N1M1 668 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 Q8N402 240 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 ZNF454Q8N9F8 522 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 DTX3Q8N9I9 347 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 NOXO1Q8NFA2 376 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 RNF128Q8TEB7 428 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 DCBLD2Q96PD2 775 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 MFRPQ9BY79 579 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 MRPL13Q9BYD1 178 aaKnown RBP17.46■□□□□ 0.39
VRK2-205ENST00000432057 ZCCHC4Q9H5U6 513 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 LRP12Q9Y561 859 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 PCDHGA1Q9Y5H4 931 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 CACNA1HO95180 2353 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 AHCTF1Q8WYP5 2266 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 FREM2Q5SZK8 3169 aa17.46■□□□□ 0.39
VRK2-205ENST00000432057 TRABD2BA6NFA1 517 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 TMEM212A6NML5 194 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 TERTO14746 1132 aaKnown RBP17.46■□□□□ 0.38
VRK2-205ENST00000432057 RANBP1P43487 201 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 MFGE8Q08431 387 aaPredicted RBP17.46■□□□□ 0.38
VRK2-205ENST00000432057 RIN1Q13671 783 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 TMEM225Q6GV28 225 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 TMPPEQ6ZT21 453 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 NRARPQ7Z6K4 114 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 RDH10Q8IZV5 341 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 OXGR1Q96P68 337 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 NEURL2Q9BR09 285 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 CYSLTR2Q9NS75 346 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 SACM1LQ9NTJ5 587 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 GTF2A1LQ9UNN4 478 aa17.46■□□□□ 0.38
VRK2-205ENST00000432057 A0A0G2JMP0 313 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 A0A0X1KG70 313 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 LOC101059948A0A1B0GTJ6 334 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 ZNF254O75437 659 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 PMS2P2O95744 297 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 PNPP00491 289 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 PGA4P0DJD7 388 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 PGA3P0DJD8 388 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 RFX2P48378 723 aa17.45■□□□□ 0.38
VRK2-205ENST00000432057 CLRN1P58418 232 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms