RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 PIK3IP1Q96FE7 263 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 LRR1Q96L50 414 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 HS3ST6Q96QI5 342 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 IL4I1Q96RQ9 567 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 NMNAT3Q96T66 252 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 EMC6Q9BV81 110 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 PLEKHF2Q9H8W4 249 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 ASB6Q9NWX5 421 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
LAMA4-208ENST00000431543 MAP1AP78559 2803 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 E9PQ18 207 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 PRKYO43930 277 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 TRMUO75648 421 aaKnown RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CLIC3O95833 236 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CRABP1P29762 137 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CDKN2AP42771 156 aaKnown RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CSNK1A1P48729 337 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CENPAP49450 140 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 BLVRAP53004 296 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CD47Q08722 323 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CAMK2DQ13557 499 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 SLC25A30Q5SVS4 291 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CARD17Q5XLA6 110 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 FBXW9Q5XUX1 488 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 CXXC5Q7LFL8 322 aaKnown RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 BHLHA15Q7RTS1 189 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 ABHD12BQ7Z5M8 362 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 WFDC8Q8IUA0 241 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 GID4Q8IVV7 300 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 ENTHD1Q8IYW4 607 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 GPR137CQ8N3F9 429 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 SDR9C7Q8NEX9 313 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 STEAP2Q8NFT2 490 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 OR2T4Q8NH00 348 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 RHOXF1Q8NHV9 184 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 ZNF519Q8TB69 540 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 KISS1RQ969F8 398 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 OR2M2Q96R28 347 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 HDHD5Q9BXW7 423 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 SLC7A10Q9NS82 523 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 VSX1Q9NZR4 365 aaPredicted RBP12.54□□□□□ -0.4
LAMA4-208ENST00000431543 UPB1Q9UBR1 384 aa12.54□□□□□ -0.4
LAMA4-208ENST00000431543 MYO9AB2RTY4 2548 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 SLC2A10O95528 541 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 GNAO1P09471 354 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 PPP3CBP16298 524 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 COX5AP20674 150 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 IL32P24001 234 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 SLC25A1P53007 311 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 ISL1P61371 349 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 RPS7P62081 194 aaKnown RBP12.53□□□□□ -0.4
LAMA4-208ENST00000431543 EFNB1P98172 346 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 TEKQ02763 1124 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 FAPQ12884 760 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 CRMP1Q14194 572 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 MAD2L1BPQ15013 274 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-208ENST00000431543 TAB1Q15750 504 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 OCLNQ16625 522 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 MESTQ5EB52 335 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 TSPO2Q5TGU0 170 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 C9orf135Q5VTT2 229 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 PLBD1Q6P4A8 553 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 NHLRC1Q6VVB1 395 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 ZNF433Q8N7K0 673 aaPredicted RBP12.53□□□□□ -0.4
LAMA4-208ENST00000431543 POMGNT2Q8NAT1 580 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 SYT14Q8NB59 555 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 NPEPL1Q8NDH3 523 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 OR10A4Q9H209 315 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 RERGLQ9H628 205 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 SRA1Q9HD15 236 aaKnown RBP12.53□□□□□ -0.4
LAMA4-208ENST00000431543 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.53□□□□□ -0.4
LAMA4-208ENST00000431543 MOKQ9UQ07 419 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 CCDC168Q8NDH2 2452 aa12.53□□□□□ -0.4
LAMA4-208ENST00000431543 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-208ENST00000431543 SLC22A23A1A5C7 686 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 SLC22A31A6NKX4 558 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.41
LAMA4-208ENST00000431543 CNOT4O95628 575 aaKnown RBP12.52□□□□□ -0.41
LAMA4-208ENST00000431543 PGA4P0DJD7 388 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 PGA3P0DJD8 388 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 ATP6V1E1P36543 226 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 SELENOPP49908 381 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF84P51523 738 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 CDK5R2Q13319 367 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 TMED1Q13445 227 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 KLHL12Q53G59 568 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 SLC35D3Q5M8T2 416 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 ZNF362Q5T0B9 420 aaPredicted RBP12.52□□□□□ -0.41
LAMA4-208ENST00000431543 LCN1P1Q5VSP4 162 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 NXNL2Q5VZ03 156 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 SEZ6L2Q6UXD5 910 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 C20orf196Q8IYI0 205 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 CYB561A3Q8NBI2 242 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 NOXO1Q8NFA2 376 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 PROKR2Q8NFJ6 384 aa12.52□□□□□ -0.41
LAMA4-208ENST00000431543 HDAC2Q92769 488 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms