RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MSR1P21757 451 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 CDAP32320 146 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 BLVRAP53004 296 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SH3BGRP55822 239 aaPredicted RBP6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ADAM8P78325 824 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ARF1P84077 181 aaKnown RBP6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMED1Q13445 227 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SGCAQ16586 387 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 C4orf17Q53FE4 359 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 MTFR2Q6P444 385 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF813Q6ZN06 617 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 Q6ZT83 130 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 AHSA2Q719I0 299 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SHFQ7M4L6 423 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 LUZP2Q86TE4 346 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ERI1Q8IV48 349 aaKnown RBP6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 RP1L1Q8IWN7 2480 aaPredicted RBP6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF610Q8N9Z0 462 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF511Q8NB15 262 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC26A10Q8NG04 563 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNRF4Q8WWF5 429 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 C11orf40Q8WZ69 217 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 CCDC120Q96HB5 630 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 INTS14Q96SY0 518 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 TEAD3Q99594 435 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 RHNO1Q9BSD3 238 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 EMC7Q9NPA0 242 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 POLE4Q9NR33 117 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 TMEM38BQ9NVV0 291 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SCN3BQ9NY72 215 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 TAS2R16Q9NYV7 291 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 COQ3Q9NZJ6 369 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZNF629Q9UEG4 869 aaPredicted RBP6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 RPL36Q9Y3U8 105 aaKnown RBP6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 UGT2A1Q9Y4X1 527 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 COMMD3-BMI1R4GMX3 469 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 A0A096LPE4 126 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 A0A1W2PPZ6 126 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CIB4A0PJX0 185 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 IRGMA1A4Y4 181 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF99A8MXY4 864 aaPredicted RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 PTGES3LE9PB15 166 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MSTNO14793 375 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 LYZL6O75951 148 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MPZL1O95297 269 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 FARS2O95363 451 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CNOT4O95628 575 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 FADS2O95864 444 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CGAP01215 116 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 TFP02787 698 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ITGA5P08648 1049 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CCDC159P0C7I6 412 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF823P16415 610 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 NPR2P20594 1047 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 IL32P24001 234 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 EEF1B2P24534 225 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 LAP3P28838 519 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MPGP29372 298 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CHRNB4P30926 498 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 HOXC12P31275 282 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CAPZA2P47755 286 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF133P52736 654 aaPredicted RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CHN2P52757 468 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 FOXG1P55316 489 aaPredicted RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 CSNK2BP67870 215 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACTC1P68032 377 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACTA1P68133 377 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MRPS34P82930 218 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ADORA2A-AS1P86434 159 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 TGFBR3Q03167 851 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 HSF2Q03933 536 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 POU4F2Q12837 409 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 GGTLC2Q14390 218 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 P2RY6Q15077 328 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MEP1BQ16820 701 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 RBM48Q5RL73 367 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 LINC01590Q5TEZ4 76 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 LAIR2Q6ISS4 152 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 KLHL24Q6TFL4 600 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 UGT2A3Q6UWM9 527 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 BEND4Q6ZU67 534 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 FOXL2NBQ6ZUU3 175 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MRGPRGQ86SM5 289 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 RELL2Q8NC24 303 aaPredicted RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF540Q8NDQ6 660 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR10H4Q8NGA5 316 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR6N2Q8NGY6 317 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ASB5Q8WWX0 329 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 LGALS12Q96DT0 336 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF837Q96EG3 531 aaPredicted RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 FOXB1Q99853 325 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 COPS4Q9BT78 406 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 NELFAQ9H3P2 528 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 WDR76Q9H967 626 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 ADGRL4Q9HBW9 690 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 PLSCR4Q9NRQ2 329 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 MRPL22Q9NWU5 206 aaKnown RBP6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 GALNT8Q9NY28 637 aa6.96□□□□□ -1.3
HMGA1P4-201ENST00000428643 PSORS1C1Q9UIG5 152 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms