RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 RFLNBQ8N5W9 214 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 LRRC75AQ8NAA5 344 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 ICA1LQ8NDH6 482 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 AKR7LQ8NHP1 331 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 ZNF519Q8TB69 540 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 VIPAS39Q9H9C1 493 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 BAG5Q9UL15 447 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 A4GNTQ9UNA3 340 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 SNX13Q9Y5W8 968 aa13.23□□□□□ -0.29
SEC13-210ENST00000428626 LOC100653049A0A140TA62 436 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 KRT34O76011 436 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 VENTXO95231 258 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 AVPP01185 164 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 MSMBP08118 114 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 MAKP20794 623 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 RBMXP38159 391 aaKnown RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 MPV17P39210 176 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 DAP3P51398 398 aaKnown RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 LRRC23Q53EV4 343 aaPredicted RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 COQ5Q5HYK3 327 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 SPATA46Q5T0L3 261 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 LIPNQ5VXI9 398 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 DPPA2Q7Z7J5 298 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 NSMAFQ92636 917 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 BCL2L14Q9BZR8 327 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 POLR2J2Q9GZM3 115 aaKnown RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 POLR2J3Q9H1A7 115 aaKnown RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 TXNIPQ9H3M7 391 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 C1orf198Q9H425 327 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 METTL17Q9H7H0 456 aaPredicted RBP13.22□□□□□ -0.29
SEC13-210ENST00000428626 SIAEQ9HAT2 523 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 MAN2C1Q9NTJ4 1040 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 FGFR1OP2Q9NVK5 253 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 HIF3AQ9Y2N7 669 aa13.22□□□□□ -0.29
SEC13-210ENST00000428626 IQCMA0A1B0GVH7 501 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 FAM220BPB1ANY3 271 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 ENTPD5O75356 428 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 DEAF1O75398 565 aaPredicted RBP13.21□□□□□ -0.29
SEC13-210ENST00000428626 IGHV3-13P01766 116 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 TFP02787 698 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 KDELR2P33947 212 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 RAD52P43351 418 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 YAP1P46937 504 aaKnown RBP13.21□□□□□ -0.29
SEC13-210ENST00000428626 ERVK-25P63136 954 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 PSG4Q00888 419 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 MVKQ03426 396 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 HSF2Q03933 536 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 PLP2Q04941 152 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 TOP3AQ13472 1001 aaPredicted RBP13.21□□□□□ -0.29
SEC13-210ENST00000428626 SPRNQ5BIV9 151 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 ERICH5Q6P6B1 374 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 UGT2A3Q6UWM9 527 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 IGFN1Q86VF2 1251 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 OR1J2Q8NGS2 313 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 OR1J1Q8NGS3 322 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 C11orf40Q8WZ69 217 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 LRRC37BQ96QE4 947 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 SH3GL1Q99961 368 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 ZNF416Q9BWM5 594 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 WNT5BQ9H1J7 359 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 NKIRAS2Q9NYR9 191 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 MED31Q9Y3C7 131 aa13.21□□□□□ -0.29
SEC13-210ENST00000428626 NPIPB13A6NJU9 1138 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 NPIPB4C9JG80 1138 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 J3KTA2 159 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 FFAR1O14842 300 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 SCG5P05408 212 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 THRBP10828 461 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 IFI30P13284 250 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 CCNOP22674 350 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 STOMP27105 288 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 APLNRP35414 380 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 CRYBB2P43320 205 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 MMP15P51511 669 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 ARFIP2P53365 341 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 CD47Q08722 323 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 SGCAQ16586 387 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 TSTQ16762 297 aaKnown RBP13.2□□□□□ -0.3
SEC13-210ENST00000428626 MMEL1Q495T6 779 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 ALG10Q5BKT4 473 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 THEM4Q5T1C6 240 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 RFPL4BQ6ZWI9 263 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 USP51Q70EK9 711 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 VTCN1Q7Z7D3 282 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 MICU2Q8IYU8 434 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 SEMA6DQ8NFY4 1073 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 IPCEF1Q8WWN9 437 aaPredicted RBP13.2□□□□□ -0.3
SEC13-210ENST00000428626 BPIFA2Q96DR5 249 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 MARS2Q96GW9 593 aaKnown RBP13.2□□□□□ -0.3
SEC13-210ENST00000428626 TPD52L3Q96J77 140 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 SMURF2Q9HAU4 748 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 G6PC2Q9NQR9 355 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 CMTM6Q9NX76 183 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 SLCO1C1Q9NYB5 712 aa13.2□□□□□ -0.3
SEC13-210ENST00000428626 RHCGQ9UBD6 479 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms