RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 NKPD1Q17RQ9 610 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 TBRG1Q3YBR2 411 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 MESTQ5EB52 335 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 TIMM23BQ5SRD1 257 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 THEM4Q5T1C6 240 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 C10orf128Q5T292 105 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 FAM205BPQ63HN1 556 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 KDM4DQ6B0I6 523 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 OR7E24Q6IFN5 339 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ACSM5Q6NUN0 579 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 RPL13AP3Q6NVV1 102 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ANKRD16Q6P6B7 361 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 HDDC2Q7Z4H3 204 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 REC114Q7Z4M0 266 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 P2RY8Q86VZ1 359 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 SVOPLQ8N434 492 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 LNX2Q8N448 690 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ATG16L2Q8NAA4 619 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 C1orf162Q8NEQ5 155 aaPredicted RBP6.48□□□□□ -1.37
LINC01049-201ENST00000426840 FANK1Q8TC84 345 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 MAGEE2Q8TD90 523 aaPredicted RBP6.48□□□□□ -1.37
LINC01049-201ENST00000426840 HSD17B8Q92506 261 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ZC3HAV1LQ96H79 300 aaKnown RBP6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF570Q96NI8 536 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 RBP7Q96R05 134 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ALG12Q9BV10 488 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 IFT27Q9BW83 186 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 TSSK6Q9BXA6 273 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ULBP2Q9BZM5 246 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 NDEL1Q9GZM8 345 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 GABARAPL1Q9H0R8 117 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 B3GAT2Q9NPZ5 323 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 VSX1Q9NZR4 365 aaPredicted RBP6.48□□□□□ -1.37
LINC01049-201ENST00000426840 STX18Q9P2W9 335 aaKnown RBP6.48□□□□□ -1.37
LINC01049-201ENST00000426840 TMEFF2Q9UIK5 374 aaPredicted RBP6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ADAM30Q9UKF2 790 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 OAZ3Q9UMX2 235 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 POFUT2Q9Y2G5 429 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 UGT2A1Q9Y4X1 527 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 SLC25A15Q9Y619 301 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 CACNA1DQ01668 2161 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 RTTNQ86VV8 2226 aa6.48□□□□□ -1.37
LINC01049-201ENST00000426840 ABCA4P78363 2273 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ARPC4-TTLL3A0A0A6YYG9 625 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 A0A1W2PR80 420 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SAC3D1A6NKF1 404 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF99A8MXY4 864 aaPredicted RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 H7C1C5 153 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 CASKO14936 926 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 MITFO75030 526 aaPredicted RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SEC14L2O76054 403 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 HTR3BO95264 441 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SLC2A10O95528 541 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SCG5P05408 212 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 PRF1P14222 555 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 LOXP28300 417 aaPredicted RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 CRISP1P54107 249 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SH3BGRP55822 239 aaPredicted RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 LCN6P62502 163 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ELF3P78545 371 aaPredicted RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 FMODQ06828 376 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 DBPQ10586 325 aaPredicted RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 IKZF1Q13422 519 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 KRR1Q13601 381 aaKnown RBP6.47□□□□□ -1.37
LINC01049-201ENST00000426840 GINS1Q14691 196 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SLC36A3Q495N2 470 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 HIKESHIQ53FT3 197 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 CLEC12AQ5QGZ9 265 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SLC35F1Q5T1Q4 408 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 C1QTNF12Q5T7M4 302 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF813Q6ZN06 617 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 FOXL2NBQ6ZUU3 175 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 PQLC1Q8N2U9 271 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 PARP8Q8N3A8 854 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 MFSD4AQ8N468 514 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 C17orf78Q8N4C9 275 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 NPEPL1Q8NDH3 523 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ICA1LQ8NDH6 482 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 OR52E2Q8NGJ4 325 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 OR4K13Q8NH42 304 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 OR52N5Q8NH56 324 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 FGFBP3Q8TAT2 258 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 FNDC8Q8TC99 324 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 DNAJC9Q8WXX5 260 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 C14orf79Q96F83 325 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF75AQ96N20 296 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SNX18Q96RF0 628 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 NMNAT3Q96T66 252 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 SLC29A1Q99808 456 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 FOXB1Q99853 325 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 MED18Q9BUE0 208 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 OSBPL10Q9BXB5 764 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 NUAK2Q9H093 628 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 ZNF556Q9HAH1 456 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 B3GNT2Q9NY97 397 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 NPAP1Q9NZP6 1156 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 BAIAP2Q9UQB8 552 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 CADP27708 2225 aa6.47□□□□□ -1.37
LINC01049-201ENST00000426840 HEATR1Q9H583 2144 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms