RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KLHDC2Q9Y2U9 406 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 EMC9Q9Y3B6 208 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 DCHS2Q6V1P9 2916 aa11.84□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF724A8MTY0 619 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 B8ZZF3 427 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 PRODHO43272 600 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 CA7P43166 264 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 MTNR1AP48039 350 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 HIST3H3Q16695 136 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 TFAP2EQ6VUC0 442 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 TRUB1Q8WWH5 349 aaKnown RBP11.83□□□□□ -0.51
PRPF39-202ENST00000424478 TMEM54Q969K7 222 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 LGALS12Q96DT0 336 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 AMELYQ99218 206 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 GPR35Q9HC97 309 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 MEMO1Q9Y316 297 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 UGT2A1Q9Y4X1 527 aa11.83□□□□□ -0.51
PRPF39-202ENST00000424478 UBR5O95071 2799 aaPredicted RBP11.83□□□□□ -0.51
PRPF39-202ENST00000424478 HTR1AP08908 422 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 ATP6V1B1P15313 513 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 CRHBPP24387 322 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 KLHL24Q6TFL4 600 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 SSX6Q7RTT6 188 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 OR6N2Q8NGY6 317 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 OR2T4Q8NH00 348 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 FGFBP3Q8TAT2 258 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 ROS1P08922 2347 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 RAD51DO75771 328 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 LAP3P28838 519 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 OCLNQ16625 522 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 HIKESHIQ53FT3 197 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 SLC25A47Q6Q0C1 308 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 DPY19L4Q7Z388 723 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 LHFPL3Q86UP9 236 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 OR10H4Q8NGA5 316 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 C11orf40Q8WZ69 217 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 ADGRL4Q9HBW9 690 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 COPS3Q9UNS2 423 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 RCE1Q9Y256 329 aa11.83□□□□□ -0.52
PRPF39-202ENST00000424478 HELZ2Q9BYK8 2649 aaKnown RBP11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF503-AS2A6NEH8 195 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 PRR32B1ATL7 298 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 DHHO43323 396 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 SPARCP09486 303 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 MAP2K4P45985 399 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 CHN2P52757 468 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ARF1P84077 181 aaKnown RBP11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ST3GAL4Q11206 333 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 TMEM45BQ96B21 275 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ADAD1Q96M93 576 aaKnown RBP11.82□□□□□ -0.52
PRPF39-202ENST00000424478 KCNG2Q9UJ96 466 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 CADP27708 2225 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 CENPEQ02224 2701 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 NPIPB13A6NJU9 1138 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 FAM90A27PA6NNH2 459 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 NPIPB4C9JG80 1138 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ITGA5P08648 1049 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 HTR1FP30939 366 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 CEACAM8P31997 349 aaPredicted RBP11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ADAM8P78325 824 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 THEM4Q5T1C6 240 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF474Q6S9Z5 364 aaPredicted RBP11.82□□□□□ -0.52
PRPF39-202ENST00000424478 ZBTB46Q86UZ6 589 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 RELL2Q8NC24 303 aaPredicted RBP11.82□□□□□ -0.52
PRPF39-202ENST00000424478 OR52I1Q8NGK6 324 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 COPS4Q9BT78 406 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 C1QTNF6Q9BXI9 259 aa11.82□□□□□ -0.52
PRPF39-202ENST00000424478 GLCEO94923 617 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 IL18BPO95998 194 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 IGHV1-2P23083 117 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 TIMP3P35625 211 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 OR3A2P47893 321 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 ADORA2A-AS1P86434 159 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 ATCAYQ86WG3 371 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 CCDC120Q96HB5 630 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 DMRTA2Q96SC8 542 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 PARPBPQ9NWS1 579 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 PROCRQ9UNN8 238 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 FKBP7Q9Y680 259 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 HSPE1-MOB4S4R3N1 261 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 NKX2-6A6NCS4 301 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 MPZL2O60487 215 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 KHDRBS3O75525 346 aaKnown RBP11.81□□□□□ -0.52
PRPF39-202ENST00000424478 CGAP01215 116 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 CAPZA2P47755 286 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 CASP6P55212 293 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 OR2A2Q6IF42 318 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 SLC26A10Q8NG04 563 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 ASH2LQ9UBL3 628 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 PSORS1C1Q9UIG5 152 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 ZNF593O00488 134 aaPredicted RBP11.81□□□□□ -0.52
PRPF39-202ENST00000424478 AKAP8O43823 692 aaKnown RBP11.81□□□□□ -0.52
PRPF39-202ENST00000424478 FADS2O95864 444 aaKnown RBP11.81□□□□□ -0.52
PRPF39-202ENST00000424478 MT-ND2P03891 347 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 LYNP07948 512 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 GAAP10253 952 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 SLC25A1P53007 311 aa11.81□□□□□ -0.52
PRPF39-202ENST00000424478 FAM27E3Q08E93 113 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms