RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 HLA-DQA2P01906 255 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 OPN1MWP04001 364 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 MYZAPP0CAP1 466 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 OPN1MW2P0DN77 364 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 OPN1MW3P0DN78 364 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 EPORP19235 508 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 TCN1P20061 433 aaPredicted RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 TIA1P31483 386 aaKnown RBP eCLIP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 GABRA3P34903 492 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 MAGEA8P43361 318 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 SLC15A1P46059 708 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 KCNJ1P48048 391 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 PPP5CP53041 499 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 RAD23AP54725 363 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 MFAP4P55083 255 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 ATP6V0D1P61421 351 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 LCN2P80188 198 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 MRPS11P82912 194 aaKnown RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 POU3F1Q03052 451 aaPredicted RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 VPS26BQ4G0F5 336 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 ELFN2Q5R3F8 820 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 AVPI1Q5T686 147 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 C3orf33Q6P1S2 294 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 FIP1L1Q6UN15 594 aaKnown RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 CASP12Q6UXS9 341 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 PRSS45Q7RTY3 260 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 C16orf82Q7Z2V1 217 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 GPAT4Q86UL3 456 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 LINC00346Q8IVM7 164 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 CDK20Q8IZL9 346 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 OR8H3Q8N146 312 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 TEX9Q8N6V9 391 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 LRRC57Q8N9N7 239 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 NOA1Q8NC60 698 aaKnown RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 OR7G2Q8NG99 324 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 OR52E4Q8NGH9 312 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 PIGXQ8TBF5 258 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 STAG3L4Q8TBR4 150 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 GPR151Q8TDV0 419 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 ANKRD49Q8WVL7 239 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 ZNF75CPQ92670 426 aaPredicted RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 EXOSC8Q96B26 276 aaKnown RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 SLC47A1Q96FL8 570 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 GAL3ST1Q99999 423 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 NAT9Q9BTE0 207 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 IFT27Q9BW83 186 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 MRPL1Q9BYD6 325 aaKnown RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 COQ10BQ9H8M1 238 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 POPDC3Q9HBV1 291 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 SERINC1Q9NRX5 453 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 DDX18Q9NVP1 670 aaKnown RBP4.09□□□□□ -1.75
SFXN1-202ENST00000421887 NMRK1Q9NWW6 199 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 SEC14L4Q9UDX3 406 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 CES1P1Q9UKY3 287 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 CMAHPQ9Y471 501 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 PCDHGB5Q9Y5G0 923 aa4.09□□□□□ -1.75
SFXN1-202ENST00000421887 IGKV3D-15A0A087WSY6 115 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 A0A096LPK6 155 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 hCG_1809904A0A1W2PP81 198 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 A0A1W2PPE2 198 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 A0A1W2PR64 198 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 ISPDA4D126 451 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 CLDN25C9JDP6 229 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 USP17L23D6RBM5 183 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 H3BNH8 94 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 C3orf84H3BNL1 204 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 XPNPEP2O43895 674 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 FOXH1O75593 365 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 NDUFA7O95182 113 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 OXSR1O95747 527 aaPredicted RBP4.08□□□□□ -1.76
SFXN1-202ENST00000421887 MBD3O95983 291 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 KRT14P02533 472 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 ENO1P06733 434 aaKnown RBP4.08□□□□□ -1.76
SFXN1-202ENST00000421887 LINGO3P0C6S8 592 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 CECR9P0C854 216 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 SELLP14151 372 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 TMEM11P17152 192 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 GABRB1P18505 474 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 MAGEA6P43360 314 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 TAS2R39P59534 338 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 ROR2Q01974 943 aaKnown RBP4.08□□□□□ -1.76
SFXN1-202ENST00000421887 IFT88Q13099 833 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 SNTB2Q13425 540 aaKnown RBP4.08□□□□□ -1.76
SFXN1-202ENST00000421887 HEPACAMQ14CZ8 416 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 PCLAFQ15004 111 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 PDK3Q15120 406 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 ANXA2RQ3ZCQ2 193 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 MMEL1Q495T6 779 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 GLIPR1L2Q4G1C9 344 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 HIKESHIQ53FT3 197 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 CCDC92Q53HC0 331 aaPredicted RBP4.08□□□□□ -1.76
SFXN1-202ENST00000421887 DOCK11Q5JSL3 2073 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 C9orf152Q5JTZ5 239 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 KRT80Q6KB66 452 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 APOOLQ6UXV4 268 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 MOB3CQ70IA8 216 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 ZNF771Q7L3S4 317 aaPredicted RBP4.08□□□□□ -1.76
SFXN1-202ENST00000421887 TMCO5AQ8N6Q1 288 aa4.08□□□□□ -1.76
SFXN1-202ENST00000421887 OR52E2Q8NGJ4 325 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms