RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 HTR3EA5X5Y0 456 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 CDC42EP2O14613 210 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 FARS2O95363 451 aaKnown RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF32P17041 273 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 TCN1P20061 433 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 COL8A2P25067 703 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 APEX1P27695 318 aaKnown RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF84P51523 738 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 RPL27P61353 136 aaKnown RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 RPS23P62266 143 aaKnown RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 GALK2Q01415 458 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 SLC36A2Q495M3 483 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 IQCCQ4KMZ1 466 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 GKAP1Q5VSY0 366 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 FAM166AQ6J272 317 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 TMEM53Q6P2H8 277 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 HACD2Q6Y1H2 254 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 FOXL2NBQ6ZUU3 175 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 IL17RELQ6ZVW7 336 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 HDDC2Q7Z4H3 204 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 DPPA2Q7Z7J5 298 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 IGFN1Q86VF2 1251 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 PHC2Q8IXK0 858 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 LRRC18Q8N456 261 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF540Q8NDQ6 660 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 RBM15BQ8NDT2 890 aaKnown RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 SPATA3Q8NHX4 192 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 HSH2DQ96JZ2 352 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 HOPXQ9BPY8 73 aaPredicted RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 RACGAP1Q9H0H5 632 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 MS4A5Q9H3V2 200 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 CHODLQ9H9P2 273 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 SIAEQ9HAT2 523 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF346Q9UL40 294 aaKnown RBP9.45□□□□□ -0.9
SSBP3-206ENST00000420121 AP3M1Q9Y2T2 418 aa9.45□□□□□ -0.9
SSBP3-206ENST00000420121 LOC100509620A0A075B734 347 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 WNT9BO14905 357 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 CCDC22O60826 627 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 ENTPD5O75356 428 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 RP2O75695 350 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 SERPINA1P01009 418 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 IFNW1P05000 195 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 SCG5P05408 212 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 NAT2P11245 290 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 NCK1P16333 377 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 WNT5AP41221 380 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 MAGEB1P43366 347 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 UCP2P55851 309 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 CTXN1P60606 82 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 TOP3AQ13472 1001 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-206ENST00000420121 TRAM2Q15035 370 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 TAF11Q15544 211 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 IFI44LQ53G44 452 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 PABPC1L2AQ5JQF8 200 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 FAM120AOSQ5T036 256 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 FAM27BQ5VT28 67 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 RGS7BPQ6MZT1 257 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-206ENST00000420121 TBPL2Q6SJ96 375 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF101Q8IZC7 436 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 FAM156AQ8NDB6 213 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 OR13C2Q8NGS9 318 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 OR51A7Q8NH64 312 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 GEMIN6Q8WXD5 167 aaKnown RBP9.44□□□□□ -0.9
SSBP3-206ENST00000420121 ACOT11Q8WXI4 607 aaPredicted RBP9.44□□□□□ -0.9
SSBP3-206ENST00000420121 LZICQ8WZA0 190 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 NSMAFQ92636 917 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 GTF3AQ92664 365 aaKnown RBP9.44□□□□□ -0.9
SSBP3-206ENST00000420121 POM121L2Q96KW2 1035 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 SNX18Q96RF0 628 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 ALG12Q9BV10 488 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 BEX2Q9BXY8 128 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 OR51B6Q9H340 312 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 C1orf198Q9H425 327 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 RNF121Q9H920 327 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 EFCAB1Q9HAE3 211 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 CDH20Q9HBT6 801 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 STX18Q9P2W9 335 aaKnown RBP9.44□□□□□ -0.9
SSBP3-206ENST00000420121 LPAR3Q9UBY5 353 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 DUSP13Q9UII6 198 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 KCNS2Q9ULS6 477 aa9.44□□□□□ -0.9
SSBP3-206ENST00000420121 SLC22A23A1A5C7 686 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 PHF1O43189 567 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-206ENST00000420121 ZNF682O95780 498 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 TGFAP01135 160 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 IFNA2P01563 188 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 ERCC1P07992 297 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-206ENST00000420121 SAGP10523 405 aaPredicted RBP9.43□□□□□ -0.9
SSBP3-206ENST00000420121 GPR4P46093 362 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 NUDT2P50583 147 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 CHN2P52757 468 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 CDH15P55291 814 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 PSG4Q00888 419 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 CD47Q08722 323 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 ENDOGQ14249 297 aaKnown RBP9.43□□□□□ -0.9
SSBP3-206ENST00000420121 TBC1D28Q2M2D7 210 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 ALKBH6Q3KRA9 238 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 HSP90B2PQ58FF3 399 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 TMPRSS11FQ6ZWK6 438 aa9.43□□□□□ -0.9
SSBP3-206ENST00000420121 MBOAT2Q6ZWT7 520 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms