RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ZFP1Q6P2D0 407 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 SHQ1Q6PI26 577 aaKnown RBP11.63□□□□□ -0.55
TMEM248-203ENST00000418375 TMEM179BQ7Z7N9 219 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 JAZF1Q86VZ6 243 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 SLC38A2Q96QD8 506 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 NIPSNAP1Q9BPW8 284 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 KCNS3Q9BQ31 491 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 KCNN2Q9H2S1 579 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 CRNNQ9UBG3 495 aaPredicted RBP11.63□□□□□ -0.55
TMEM248-203ENST00000418375 FBXL3Q9UKT7 428 aa11.63□□□□□ -0.55
TMEM248-203ENST00000418375 IGKV1D-43A0A0B4J1Z2 117 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 RAB36O95755 333 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 PLAUP00749 431 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 RENP00797 406 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 IGKV3-15P01624 115 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 HLA-HP01893 362 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 FOSL1P15407 271 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 NPRL3Q12980 569 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SLC36A2Q495M3 483 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 DNM1P34Q6PK57 102 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SLC22A25Q6T423 547 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SLC16A14Q7RTX9 510 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 MDP1Q86V88 176 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 HIPK1Q86Z02 1210 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SKA3Q8IX90 412 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 ATG16L2Q8NAA4 619 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 WFDC11Q8NEX6 87 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 OR5K1Q8NHB7 308 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 TEX47Q8TBZ9 253 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 DNAJC9Q8WXX5 260 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 AKAP1Q92667 903 aaKnown RBP eCLIP11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SNX18Q96RF0 628 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SH3GL3Q99963 347 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 TSSK6Q9BXA6 273 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SYT4Q9H2B2 425 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 RNF121Q9H920 327 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SEC61A2Q9H9S3 476 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 SIAEQ9HAT2 523 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 NTN4Q9HB63 628 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 DLL4Q9NR61 685 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 BEX4Q9NWD9 120 aaPredicted RBP11.62□□□□□ -0.55
TMEM248-203ENST00000418375 B3GNT2Q9NY97 397 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
TMEM248-203ENST00000418375 KIF17Q9P2E2 1029 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 POU2F3Q9UKI9 436 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 BAIAP2Q9UQB8 552 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 UGT2A1Q9Y4X1 527 aa11.62□□□□□ -0.55
TMEM248-203ENST00000418375 IGHV1-18A0A0C4DH31 117 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 A0A1W2PPL8 197 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 H3BN98 237 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 BHLHE40O14503 412 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 HS3ST1O14792 307 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 SLC16A7O60669 478 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 KHDRBS3O75525 346 aaKnown RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 SOX14O95416 240 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 IGLV1-44P01699 117 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 CRYAAP02489 173 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 HIST1H1CP16403 213 aaKnown RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PRKACGP22612 351 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 CRABP1P29762 137 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 CDAP32320 146 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 CDKN2AP42771 156 aaKnown RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PTDSS1P48651 473 aaKnown RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 IDH3GP51553 393 aaPredicted RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 CDH11P55287 796 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 RAB1AP62820 205 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PIGFQ07326 219 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 SGCAQ16586 387 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 ZNF672Q499Z4 452 aaPredicted RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 TMEM53Q6P2H8 277 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 LEG1Q6P5S2 330 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PTCHD4Q6ZW05 846 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 ZDHHC13Q8IUH4 622 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 HS3ST5Q8IZT8 346 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 IL17RDQ8NFM7 739 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 KBTBD8Q8NFY9 601 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 OR2T33Q8NG76 320 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 OR52E2Q8NGJ4 325 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 OR4K13Q8NH42 304 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PYDC1Q8WXC3 89 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PLA2G12AQ9BZM1 189 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 RERGLQ9H628 205 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 PRR14LQ5THK1 2151 aa11.61□□□□□ -0.55
TMEM248-203ENST00000418375 ZNF469Q96JG9 3925 aaPredicted RBP11.61□□□□□ -0.55
TMEM248-203ENST00000418375 ZNF503-AS2A6NEH8 195 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 SHISA9B4DS77 424 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 G3V2T6 193 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 CECR9P0C854 216 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 OSMP13725 252 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 CTLA4P16410 223 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 ZNF23P17027 643 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 MSR1P21757 451 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 GIPRP48546 466 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 NKX6-1P78426 367 aaPredicted RBP11.6□□□□□ -0.55
TMEM248-203ENST00000418375 NAAAQ02083 359 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.6□□□□□ -0.55
TMEM248-203ENST00000418375 SPOCK1Q08629 439 aa11.6□□□□□ -0.55
TMEM248-203ENST00000418375 SLC35F1Q5T1Q4 408 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms