RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 VDAC3Q9Y277 283 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 LOC101059948A0A1B0GTJ6 334 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 SUSD5O60279 629 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 IGF2P01344 180 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 CLPSP04118 112 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 MAP2K6P52564 334 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 SKP1P63208 163 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 BTN1A1Q13410 526 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 EIF2B1Q14232 305 aaKnown RBP10.74□□□□□ -0.69
LIMK1-202ENST00000418310 CSRP2Q16527 193 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 FAM74A1Q5RGS3 127 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF626Q68DY1 528 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 LANCL3Q6ZV70 420 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 ARHGEF39Q8N4T4 335 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 RBPMSQ93062 196 aaKnown RBP10.74□□□□□ -0.69
LIMK1-202ENST00000418310 NUDT22Q9BRQ3 303 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 TRAF4Q9BUZ4 470 aaPredicted RBP10.74□□□□□ -0.69
LIMK1-202ENST00000418310 TINAGL1Q9GZM7 467 aaPredicted RBP10.74□□□□□ -0.69
LIMK1-202ENST00000418310 PDE7BQ9NP56 450 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 EMC9Q9Y3B6 208 aa10.74□□□□□ -0.69
LIMK1-202ENST00000418310 URB1O60287 2271 aaKnown RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 PRAF2O60831 178 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 ALOX12BO75342 701 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 DRD1P21728 446 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 EFNA3P52797 238 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 RAB11BQ15907 218 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CLLU1Q5K131 121 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 KIAA0895LQ68EN5 471 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 GLRX5Q86SX6 157 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CMIPQ8IY22 773 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 SDR16C5Q8N3Y7 309 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 EXD3Q8N9H8 876 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CMBLQ96DG6 245 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 SEC22AQ96IW7 307 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 DHDHQ9UQ10 334 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 COA3Q9Y2R0 106 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 H3BML4 177 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 KCNAB3O43448 404 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 AMY2AP04746 511 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CALCBP10092 127 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 PRSS3P35030 304 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CAPZBP47756 277 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 RBMS2Q15434 407 aaKnown RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF417Q8TAU3 575 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 ASB12Q8WXK4 309 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 PMM1Q92871 262 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 MRPL38Q96DV4 380 aaKnown RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 SLC25A44Q96H78 314 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CYYR1Q96J86 154 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 SPACA5Q96QH8 159 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 EMC6Q9BV81 110 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 TMEM185BQ9H7F4 350 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 KCNN3Q9UGI6 736 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 MKL2Q9ULH7 1088 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 TMEM235A6NFC5 223 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 NAP1L6A6NFF2 107 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 MCRIP1C9JLW8 97 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 SRPX2O60687 465 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 PRKACBP22694 351 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 RAG2P55895 527 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 MOGAT2Q3SYC2 334 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 FAM219AQ8IW50 185 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 GALNT16Q8N428 558 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 HOXB13Q92826 284 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 TCTN2Q96GX1 697 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 LCORQ96JN0 433 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF587Q96SQ5 575 aaPredicted RBP10.73□□□□□ -0.69
LIMK1-202ENST00000418310 FBRSQ9HAH7 460 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 PLEKHA1Q9HB21 404 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 CUTCQ9NTM9 273 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 MMP17Q9ULZ9 603 aa10.73□□□□□ -0.69
LIMK1-202ENST00000418310 FAM221BA6H8Z2 402 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF749O43361 778 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 XRCC3O43542 346 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 RRASP10301 218 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 RORAP35398 523 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 FAUP35544 74 aaKnown RBP10.72□□□□□ -0.69
LIMK1-202ENST00000418310 HSD17B7P56937 341 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 RTN4RL2Q86UN3 420 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 CHST4Q8NCG5 386 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 OTOSQ8NHW6 89 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 POFUT1Q9H488 388 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 SDHAF2Q9NX18 166 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 MED29Q9NX70 200 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 PLCL2Q9UPR0 1127 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 HS3ST3A1Q9Y663 406 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 SDK2Q58EX2 2172 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 TRBV5-5A0A0J9YX44 114 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 TMEM272A0A1B0GTI8 110 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 LOC105371267A0A1B0GV96 52 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 TMEM212A6NML5 194 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 F5H5P2 479 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 H7C417 338 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 ZNF254O75437 659 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 GNALP38405 381 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 OR1D5P58170 312 aa10.72□□□□□ -0.69
LIMK1-202ENST00000418310 MRPS21P82921 87 aaKnown RBP10.72□□□□□ -0.69
LIMK1-202ENST00000418310 INSM1Q01101 510 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms