RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 THEM4Q5T1C6 240 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 PODNL1Q6PEZ8 512 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 TMPRSS11FQ6ZWK6 438 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 LRRC18Q8N456 261 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 LRRC75AQ8NAA5 344 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 FAM156AQ8NDB6 213 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 OR1J2Q8NGS2 313 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 SLC7A13Q8TCU3 470 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 NEU4Q8WWR8 484 aaPredicted RBP13.22□□□□□ -0.29
NUP50-204ENST00000417702 MRPL24Q96A35 216 aaKnown RBP13.22□□□□□ -0.29
NUP50-204ENST00000417702 NMD3Q96D46 503 aaKnown RBP13.22□□□□□ -0.29
NUP50-204ENST00000417702 CDH20Q9HBT6 801 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
NUP50-204ENST00000417702 KRCC1Q9NPI7 259 aaPredicted RBP13.22□□□□□ -0.29
NUP50-204ENST00000417702 TMEM129A0AVI4 362 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 NDUFS8O00217 210 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 GPRIN2O60269 458 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 T-ENOLP0DO92 83 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 CDAP32320 146 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 EVX1P49640 407 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 SMIM11AP58511 58 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 ERVK-25P63136 954 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 HSF2Q03933 536 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 FMODQ06828 376 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 KRTAP1-1Q07627 177 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 LOXL1Q08397 574 aaPredicted RBP13.21□□□□□ -0.29
NUP50-204ENST00000417702 SGCAQ16586 387 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 TBC1D28Q2M2D7 210 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 ZBED5Q49AG3 693 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 SLC25A47Q6Q0C1 308 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 TSEN54Q7Z6J9 526 aaKnown RBP13.21□□□□□ -0.29
NUP50-204ENST00000417702 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 ARHGAP24Q8N264 748 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 PYURFQ96I23 114 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 NSMCE2Q96MF7 247 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 TSPAN32Q96QS1 320 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 PIMREGQ9BSJ6 248 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 GRHPRQ9UBQ7 328 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 CD300AQ9UGN4 299 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 V9GYQ6 96 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 CR1P17927 2039 aa13.21□□□□□ -0.29
NUP50-204ENST00000417702 ABCA2Q9BZC7 2435 aa13.21□□□□□ -0.3
NUP50-204ENST00000417702 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 XKRYO14609 159 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 CDC42EP2O14613 210 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 SYNGR3O43761 229 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 TLX2O43763 284 aaPredicted RBP13.2□□□□□ -0.3
NUP50-204ENST00000417702 CD5LO43866 347 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 CD14P08571 375 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 ADRA2AP08913 450 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 USF1P22415 310 aaPredicted RBP13.2□□□□□ -0.3
NUP50-204ENST00000417702 APLNRP35414 380 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 SELENOVP59797 346 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 VLDLRP98155 873 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 FHL1Q13642 323 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 FXNQ16595 210 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 ARIH2OSQ8N7S6 290 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 ZNF519Q8TB69 540 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 FAM46AQ96IP4 442 aaKnown RBP13.2□□□□□ -0.3
NUP50-204ENST00000417702 C7orf34Q96L11 122 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 SYT3Q9BQG1 590 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 MRPL37Q9BZE1 423 aaKnown RBP13.2□□□□□ -0.3
NUP50-204ENST00000417702 C1orf21Q9H246 121 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 YAE1D1Q9NRH1 226 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 AURKCQ9UQB9 309 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 UGT2A1Q9Y4X1 527 aa13.2□□□□□ -0.3
NUP50-204ENST00000417702 A0A096LNT2 108 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 IGKV1D-43A0A0B4J1Z2 117 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 M0R233 179 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 UBOX5O94941 541 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 DIRAS1O95057 198 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 NDUFB2O95178 105 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
NUP50-204ENST00000417702 CCL2P13500 99 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 MSX2P35548 267 aaPredicted RBP13.19□□□□□ -0.3
NUP50-204ENST00000417702 RAD52P43351 418 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 TMEM249Q2WGJ8 235 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 PABPC1L2AQ5JQF8 200 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 RGS7BPQ6MZT1 257 aaPredicted RBP13.19□□□□□ -0.3
NUP50-204ENST00000417702 RINLQ6ZS11 566 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
NUP50-204ENST00000417702 CLDN22Q8N7P3 220 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 OR52J3Q8NH60 311 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 NABP1Q96AH0 204 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 FOXN4Q96NZ1 517 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 REV1Q9UBZ9 1251 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
NUP50-204ENST00000417702 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 A0A1W2PPL8 197 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 ARPC2O15144 300 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 AHCYL1O43865 530 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 SNAP29O95721 258 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 LCKP06239 509 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 FAM157BP0CG42 384 aa13.18□□□□□ -0.3
NUP50-204ENST00000417702 DAOP14920 347 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms