RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CBR1P16152 277 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 ZNF23P17027 643 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 NOS3P29474 1203 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 GIPRP48546 466 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 PTDSS1P48651 473 aaKnown RBP10.86□□□□□ -0.67
SKA1-203ENST00000417656 ARHGDIAP52565 204 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 CDH11P55287 796 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.86□□□□□ -0.67
SKA1-203ENST00000417656 DBPQ10586 325 aaPredicted RBP10.86□□□□□ -0.67
SKA1-203ENST00000417656 ETFDHQ16134 617 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 CD300LDQ6UXZ3 194 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 B3GLCTQ6Y288 498 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 FOXL2NBQ6ZUU3 175 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 CCDC36Q8IYA8 594 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 LRRC18Q8N456 261 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 IQCF1Q8N6M8 205 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 ATG16L2Q8NAA4 619 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 LILRB1Q8NHL6 650 aaPredicted RBP10.86□□□□□ -0.67
SKA1-203ENST00000417656 TEX47Q8TBZ9 253 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 AKAP1Q92667 903 aaKnown RBP eCLIP10.86□□□□□ -0.671e-6■■□□□ 13
SKA1-203ENST00000417656 NRBF2Q96F24 287 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 NMNAT3Q96T66 252 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 SEMA6AQ9H2E6 1030 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 RERGLQ9H628 205 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 ZNF556Q9HAH1 456 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 B3GNT2Q9NY97 397 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 REV1Q9UBZ9 1251 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 PLEKHA6Q9Y2H5 1048 aa10.86□□□□□ -0.67
SKA1-203ENST00000417656 H3BN98 237 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 HS3ST1O14792 307 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 AHCYL1O43865 530 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 SLC16A7O60669 478 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 ENTPD5O75356 428 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 KHDRBS3O75525 346 aaKnown RBP10.85□□□□□ -0.67
SKA1-203ENST00000417656 RAB36O95755 333 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 RENP00797 406 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 ANXA8P13928 327 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 ARR3P36575 388 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 NAAAQ02083 359 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 COX10Q12887 443 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 SGCAQ16586 387 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 ZSCAN26Q16670 478 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 PGGHGQ32M88 737 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 NRN1LQ496H8 165 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 OTPQ5XKR4 325 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 ZFP1Q6P2D0 407 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 FAHD1Q6P587 224 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 SLC16A14Q7RTX9 510 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 OR2T33Q8NG76 320 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 OR52E2Q8NGJ4 325 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 PKP2Q99959 881 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 BDH2Q9BUT1 245 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 NUAK2Q9H093 628 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 GABARAPL1Q9H0R8 117 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 MOV10Q9HCE1 1003 aaKnown RBP10.85□□□□□ -0.67
SKA1-203ENST00000417656 EMC7Q9NPA0 242 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 RPRD1BQ9NQG5 326 aaKnown RBP10.85□□□□□ -0.67
SKA1-203ENST00000417656 POLE4Q9NR33 117 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 ST6GALNAC2Q9UJ37 374 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 POU2F3Q9UKI9 436 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 MOKQ9UQ07 419 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 TACC2O95359 2948 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 CADP27708 2225 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 PDZD2O15018 2839 aa10.85□□□□□ -0.67
SKA1-203ENST00000417656 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 AKAP6Q13023 2319 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 OR6C68A6NDL8 312 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 SAC3D1A6NKF1 404 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 G3V2T6 193 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 DCTN6O00399 190 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 IDH3BO43837 385 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 GPANK1O95872 356 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 RAF1P04049 648 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 SCG5P05408 212 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 OSMP13725 252 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 NPR2P20594 1047 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 MSR1P21757 451 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 PAX7P23759 505 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 POU1F1P28069 291 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 LAP3P28838 519 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 CALCRP30988 508 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 DAPP51397 102 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 RAB1AP62820 205 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 RAB39AQ14964 217 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 C3orf36Q3SXR2 165 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 SLC36A2Q495M3 483 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 ZNF672Q499Z4 452 aaPredicted RBP10.84□□□□□ -0.67
SKA1-203ENST00000417656 TMEM53Q6P2H8 277 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 HIPK1Q86Z02 1210 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 LNX2Q8N448 690 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 CYB561A3Q8NBI2 242 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 ICA1LQ8NDH6 482 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 FBXO17Q96EF6 278 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 RADILQ96JH8 1075 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 ZNF75AQ96N20 296 aa10.84□□□□□ -0.67
SKA1-203ENST00000417656 SNX18Q96RF0 628 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms