RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 OR10A5Q9H207 317 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 OR10A2Q9H208 303 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-202ENST00000415950 SLC22A7Q9Y694 548 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 PRAMEF27A3QJZ7 478 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 AGAP14A8MT82 685 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 STMND1H3BQB6 276 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 TK1P04183 234 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 AVPI1Q5T686 147 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 KIAA0907Q7Z7F0 614 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-202ENST00000415950 GRAMD2AQ8IUY3 354 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-202ENST00000415950 PLPP5Q8NEB5 264 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 FGGYQ96C11 551 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 C14orf79Q96F83 325 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 SDF2Q99470 211 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 FKRPQ9H9S5 495 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 NPFFR2Q9Y5X5 522 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 V9GYH0 126 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 CACNA1EQ15878 2313 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 PRRT4C9JH25 899 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 H0Y8X5 98 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 MSTNO14793 375 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 HOXB3P14651 431 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-202ENST00000415950 ATF1P18846 271 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 TRA2BP62995 288 aaKnown RBP11.83□□□□□ -0.52
SCN1B-202ENST00000415950 NR0B2Q15466 257 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 DUSP6Q16828 381 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 ST3GAL2Q16842 350 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 OR4D11Q8NGI4 311 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
SCN1B-202ENST00000415950 OR52A5Q9H2C5 316 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 HRASLSQ9HDD0 168 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 GFOD1Q9NXC2 390 aa11.83□□□□□ -0.52
SCN1B-202ENST00000415950 TCRBV16S1A1N1A0A5B0 115 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 WNT1P04628 370 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 OR13C7P0DN81 318 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 NAT1P18440 290 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 BSGP35613 385 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 MRPL58Q14197 206 aaKnown RBP11.82□□□□□ -0.52
SCN1B-202ENST00000415950 C17orf47Q8NEP4 570 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 DNAJB11Q9UBS4 358 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 TRHRP34981 398 aaPredicted RBP11.82□□□□□ -0.52
SCN1B-202ENST00000415950 RABIFP47224 123 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 RPS15P62841 145 aaKnown RBP11.82□□□□□ -0.52
SCN1B-202ENST00000415950 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 NIPAL3Q6P499 406 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 OR8D4Q8NGM9 314 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 FAM174AQ8TBP5 190 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 ADAMTS18Q8TE60 1221 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 RNF141Q8WVD5 230 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 MS4A6EQ96DS6 147 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 WDR89Q96FK6 387 aaPredicted RBP11.82□□□□□ -0.52
SCN1B-202ENST00000415950 MYADMQ96S97 322 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 MED17Q9NVC6 651 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 PRSS38A1L453 326 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 FTCDNL1E5RQL4 147 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 SIGLEC5O15389 551 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 LANCL1O43813 399 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 CTNSO60931 367 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 ABLIM3O94929 683 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 AKR1C3P42330 323 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 ERVK-16P61578 105 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 SIGLEC14Q08ET2 396 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 LINC00303Q3SY05 128 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 TCTE3Q8IZS6 198 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 FBXL6Q8N531 539 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 OR4D9Q8NGE8 314 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 ARPC5LQ9BPX5 153 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 C6orf106Q9H6K1 298 aaPredicted RBP11.82□□□□□ -0.52
SCN1B-202ENST00000415950 DHCR7Q9UBM7 475 aaKnown RBP11.82□□□□□ -0.52
SCN1B-202ENST00000415950 ABCA1O95477 2261 aa11.82□□□□□ -0.52
SCN1B-202ENST00000415950 MED12Q93074 2177 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 A0A087WZY1 265 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TO15178 435 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 SULT1B1O43704 296 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PAPLNO95428 1278 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TGM6O95932 706 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PDZK1IP1Q13113 114 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MRPL22Q9NWU5 206 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 KIF25Q9UIL4 384 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MRPS28Q9Y2Q9 187 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 DLEC1Q9Y238 1755 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 A0A1B0GTH9 108 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 ARGFXA6NJG6 315 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 TMEM212A6NML5 194 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 A8MXE2 369 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 MSR1P21757 451 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 NUDT1P36639 197 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 BDH1Q02338 343 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PAN3Q58A45 887 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 RNF113BQ8IZP6 322 aaKnown RBP11.81□□□□□ -0.52
SCN1B-202ENST00000415950 OR52H1Q8NGJ2 320 aa11.81□□□□□ -0.52
SCN1B-202ENST00000415950 PRSS16Q9NQE7 514 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms