RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 GPRIN3Q6ZVF9 776 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CYP4V2Q6ZWL3 525 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 MOB3BQ86TA1 216 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 OR10H4Q8NGA5 316 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 MITD1Q8WV92 249 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PIH1D2Q8WWB5 315 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ING5Q8WYH8 240 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SLCO2A1Q92959 643 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 FAM131CQ96AQ9 280 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 IL4I1Q96RQ9 567 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CLCC1Q96S66 551 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ATP5SQ99766 215 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 NAA50Q9GZZ1 169 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 LRRC19Q9H756 370 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 KLRF1Q9NZS2 232 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LNPEPQ9UIQ6 1025 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF229Q9UJW7 825 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 STAP1Q9ULZ2 295 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SNX12Q9UMY4 172 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 NTNG1Q9Y2I2 539 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 KPTNQ9Y664 436 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PTPN13Q12923 2485 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 WDFY4Q6ZS81 3184 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 IGF2RP11717 2491 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LY6G6EA0A0G2JKS1 128 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 A0A1W2PPI3 338 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CIB4A0PJX0 185 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TUBAL3A6NHL2 446 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF724A8MTY0 619 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TMX2-CTNND1H3BSU7 103 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GOSR2O14653 212 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LDOC1O95751 146 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 KRT16P08779 473 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 FAM157CP0CG43 387 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CXCL8P10145 99 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 UMPSP11172 480 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 KCNE1P15382 129 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CD1EP15812 388 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GABRG2P18507 467 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ERVS71-1P61550 626 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 RPL8P62917 257 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 SRSF9Q13242 221 aaKnown RBP eCLIP2.14□□□□□ -2.07
MCF2-204ENST00000414978 EIF3IQ13347 325 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 KIR2DS3Q14952 304 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SGSM1Q2NKQ1 1148 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 FHL5Q5TD97 284 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 MORN5Q5VZ52 161 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 FAM219BQ5XKK7 198 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SPOPLQ6IQ16 392 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF836Q6ZNA1 936 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PEX26Q7Z412 305 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 NET1Q7Z628 596 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 VTCN1Q7Z7D3 282 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SLC47A2Q86VL8 602 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LRRC6Q86X45 466 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF547Q8IVP9 402 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF100Q8IYN0 542 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ACBD4Q8NC06 268 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TMEM104Q8NE00 496 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 BBS1Q8NFJ9 593 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 OR5B17Q8NGF7 314 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 OR56A4Q8NGH8 313 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 C16orf52Q8NHV5 167 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SLC7A13Q8TCU3 470 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TMEM159Q96B96 161 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CXorf40BQ96DE9 158 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF514Q96K75 400 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 RCHY1Q96PM5 261 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PSMB7Q99436 277 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LGMNQ99538 433 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SLC6A7Q99884 636 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.14□□□□□ -2.07
MCF2-204ENST00000414978 ABCG2Q9UNQ0 655 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CA5BQ9Y2D0 317 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 AK6Q9Y3D8 172 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 PTPRJQ12913 1337 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 FAM189A1O60320 539 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GAGE7O76087 117 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ANGPTL1O95841 491 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CLPTM1O96005 669 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PEX11BO96011 259 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 ASS1P00966 412 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 CST4P01036 141 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 FGGP02679 453 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CD74P04233 296 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GAGE12FP0CL80 117 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GAGE12GP0CL81 117 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GAGE12IP0CL82 117 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 IL2RGP31785 369 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SAA4P35542 130 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 NUP107P57740 925 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PLP1P60201 277 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CSNK2BP67870 215 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CD300CQ08708 224 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GAGE1Q13065 139 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GAGE4Q13068 117 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 P2RY6Q15077 328 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 UPP1Q16831 310 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TATDN3Q17R31 274 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 HLA-BQ31612 363 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms