RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 AGAP6Q5VW22 663 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 RAET1LQ5VY80 246 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 CISD2Q8N5K1 135 aaKnown RBP8.9□□□□□ -0.98
DDB1-202ENST00000414411 CYB561A3Q8NBI2 242 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 SNRNP40Q96DI7 357 aaKnown RBP8.9□□□□□ -0.98
DDB1-202ENST00000414411 NEDD4LQ96PU5 975 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 TMEM43Q9BTV4 400 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 SLC6A15Q9H2J7 730 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 KCNN2Q9H2S1 579 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 HAO2Q9NYQ3 351 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 COMMD3Q9UBI1 195 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 CHRNA9Q9UGM1 479 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 GRIP1Q9Y3R0 1128 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 LIPGQ9Y5X9 500 aa8.9□□□□□ -0.98
DDB1-202ENST00000414411 POLEQ07864 2286 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 TMEM72A0PK05 275 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 ELOA3DA6NLF2 546 aaPredicted RBP8.9□□□□□ -0.99
DDB1-202ENST00000414411 NPIPA5E9PKD4 350 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 DVL2O14641 736 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 ATXN7O15265 892 aaPredicted RBP8.9□□□□□ -0.99
DDB1-202ENST00000414411 NCR1O76036 304 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 IFNGP01579 166 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 MT-ND5P03915 603 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 MRPL3P09001 348 aaKnown RBP8.9□□□□□ -0.99
DDB1-202ENST00000414411 TCEA1P23193 301 aaKnown RBP8.9□□□□□ -0.99
DDB1-202ENST00000414411 FKBP2P26885 142 aaKnown RBP8.9□□□□□ -0.99
DDB1-202ENST00000414411 MTNR1BP49286 362 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 OR2B6P58173 313 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 RAC1P63000 192 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 TAB1Q15750 504 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 ELOA3BQ3SY89 546 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 ELOA3Q8NG57 546 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 SOSTQ9BQB4 213 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 TSPAN10Q9H1Z9 355 aaPredicted RBP8.9□□□□□ -0.99
DDB1-202ENST00000414411 NPAP1Q9NZP6 1156 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 NPIPA1Q9UND3 350 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 SLC6A5Q9Y345 797 aa8.9□□□□□ -0.99
DDB1-202ENST00000414411 SHANK1Q9Y566 2161 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 TRGV5A0A0B4J1U4 118 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 A8MVM7 634 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 E9PI62 339 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 PLPP2O43688 288 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 HPGDSO60760 199 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 NDUFB2O95178 105 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 GYPBP06028 91 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 STARP49675 285 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 LHX2P50458 406 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 CLDN15P56746 228 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 TAS2R43P59537 309 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 ACTC1P68032 377 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 ACTA1P68133 377 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 ZNF85Q03923 595 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 POU4F2Q12837 409 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 KRTCAP3Q53RY4 240 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 PYDC2Q56P42 97 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 C1QL3Q5VWW1 255 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 CNIH2Q6PI25 160 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 POMZP3Q6PJE2 187 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 METAP1DQ6UB28 335 aaPredicted RBP8.89□□□□□ -0.99
DDB1-202ENST00000414411 FAM180AQ6UWF9 173 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 UBQLNLQ8IYU4 475 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 SGTBQ96EQ0 304 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 SFXN2Q96NB2 322 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 POTEKPQ9BYX7 375 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 SLC19A3Q9BZV2 496 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 SLC22A4Q9H015 551 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 PPP1R3EQ9H7J1 279 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 SERINC1Q9NRX5 453 aa8.89□□□□□ -0.99
DDB1-202ENST00000414411 ACTL6AO96019 429 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 IGF2P01344 180 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 HLA-DQB1P01920 261 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ZNF708P17019 499 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 PTBP1P26599 531 aaKnown RBP eCLIP8.88□□□□□ -0.99
DDB1-202ENST00000414411 SHC1P29353 583 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 CAPZA2P47755 286 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 EVX1P49640 407 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 TDGF1P3P51864 188 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 BCL2A1Q16548 175 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.88□□□□□ -0.99
DDB1-202ENST00000414411 TMEM176BQ3YBM2 270 aaPredicted RBP8.88□□□□□ -0.99
DDB1-202ENST00000414411 PRR30Q53SZ7 412 aaPredicted RBP8.88□□□□□ -0.99
DDB1-202ENST00000414411 C3orf33Q6P1S2 294 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ARL9Q6T311 187 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 VASH1Q7L8A9 365 aaPredicted RBP8.88□□□□□ -0.99
DDB1-202ENST00000414411 NR2C2APQ86WQ0 139 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 STK35Q8TDR2 534 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 SLC25A43Q8WUT9 341 aaPredicted RBP8.88□□□□□ -0.99
DDB1-202ENST00000414411 SMPDL3BQ92485 455 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ARL5BQ96KC2 179 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 C4orf36Q96KX1 117 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 GPR137Q96N19 417 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ERMAPQ96PL5 475 aaPredicted RBP8.88□□□□□ -0.99
DDB1-202ENST00000414411 OR11A1Q9GZK7 315 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 C11orf54Q9H0W9 315 aaPredicted RBP8.88□□□□□ -0.99
DDB1-202ENST00000414411 LDAHQ9H6V9 325 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ASF1BQ9NVP2 202 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 SPRR3Q9UBC9 169 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 FAM208BQ5VWN6 2430 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 ALPK2Q86TB3 2170 aa8.88□□□□□ -0.99
DDB1-202ENST00000414411 A0A0J9YW62 118 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms