RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 PSKH2Q96QS6 385 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 SULT4A1Q9BR01 284 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 TMEM43Q9BTV4 400 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 ZSCAN5AQ9BUG6 496 aa1.98□□□□□ -2.09
PMS1-203ENST00000409593 DDX49Q9Y6V7 483 aaKnown RBP1.98□□□□□ -2.09
PMS1-203ENST00000409593 IGKV3D-11A0A0A0MRZ8 115 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 A0A1B0GVL5 298 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 F6UB75 175 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 ZNF208O43345 1280 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 SNNO75324 88 aaPredicted RBP1.97□□□□□ -2.09
PMS1-203ENST00000409593 ZNF806P0C7X5 589 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 UBTFL6P0CB48 400 aaPredicted RBP1.97□□□□□ -2.09
PMS1-203ENST00000409593 C1GALT1C1LP0DN25 315 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 SLC11A1P49279 550 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 GALNT17Q6IS24 598 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 TMEM135Q86UB9 458 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 LRP11Q86VZ4 500 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 COQ8AQ8NI60 647 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 STMN2Q93045 179 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 CAMK2N2Q96S95 79 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 SH3GL1Q99961 368 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 ERP44Q9BS26 406 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 TCHPQ9BT92 498 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 S4R3C0 116 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 SHANK1Q9Y566 2161 aa1.97□□□□□ -2.09
PMS1-203ENST00000409593 A8MUU9 505 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 GOSR2O14653 212 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 TIMM8AO60220 97 aaPredicted RBP1.96□□□□□ -2.1
PMS1-203ENST00000409593 C1orf105O95561 183 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 CCNE2O96020 404 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 IGKV1D-16P01601 117 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 FBXW4P57775 412 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 PDK3Q15120 406 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 IRF4Q15306 451 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 SAXO2Q658L1 398 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 TEX43Q6ZNM6 134 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 GMCL1P1Q8NEA9 526 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 NOXO1Q8NFA2 376 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 IFT74Q96LB3 600 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 TCEANC2Q96MN5 208 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 UBE2ZQ9H832 354 aaPredicted RBP1.96□□□□□ -2.1
PMS1-203ENST00000409593 WFDC1Q9HC57 220 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 SOX15O60248 233 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 CBR3O75828 277 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 AIFM1O95831 613 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 GUCA1CO95843 209 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 CT62P0C5K7 136 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 OPRK1P41145 380 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 PTPN20Q4JDL3 420 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 OR2A2Q6IF42 318 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 ARL9Q6T311 187 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 ZSCAN30Q86W11 494 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 GATSQ8NAP1 163 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 OR1L4Q8NGR5 311 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 C15orf40Q8WUR7 153 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 PIK3IP1Q96FE7 263 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 ZNF681Q96N22 645 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 ANKRD19PQ9H560 264 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 IKBKGQ9Y6K9 419 aa1.96□□□□□ -2.1
PMS1-203ENST00000409593 TNS2Q63HR2 1409 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 SCN1AP35498 2009 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 PPP1R2P9O14990 202 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 APCSP02743 223 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 VHLP40337 213 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 EPS15P42566 896 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 IFT88Q13099 833 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 CLINT1Q14677 625 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 PMF1Q6P1K2 205 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 PSTKQ8IV42 348 aaKnown RBP1.95□□□□□ -2.1
PMS1-203ENST00000409593 ZNF547Q8IVP9 402 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 HSD17B11Q8NBQ5 300 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 TRPV1Q8NER1 839 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 OR8U1Q8NH10 309 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 TIMM29Q9BSF4 260 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 FBXO6Q9NRD1 293 aaPredicted RBP1.95□□□□□ -2.1
PMS1-203ENST00000409593 DDX19AQ9NUU7 478 aaKnown RBP1.95□□□□□ -2.1
PMS1-203ENST00000409593 PTPRTO14522 1441 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 COL5A1P20908 1838 aaPredicted RBP1.95□□□□□ -2.1
PMS1-203ENST00000409593 SDK2Q58EX2 2172 aa1.95□□□□□ -2.1
PMS1-203ENST00000409593 PCP4L1A6NKN8 68 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 SNTNA6NMZ2 147 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 SPECC1L-ADORA2AF8WAN1 911 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 HAS3O00219 553 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 DYNC1I1O14576 645 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 PSTPIP1O43586 416 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 TSPAN12O95859 305 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 AQP2P41181 271 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 ZNF138P52744 262 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 PON2Q15165 354 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 ZNF77Q15935 545 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 ANKRD22Q5VYY1 191 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 SPECC1LQ69YQ0 1117 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 PLET1Q6UQ28 207 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 ASCL5Q7RTU5 278 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 LRRC52Q8N7C0 313 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 OR10R2Q8NGX6 335 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 RTN4IP1Q8WWV3 396 aaPredicted RBP1.94□□□□□ -2.1
PMS1-203ENST00000409593 SAV1Q9H4B6 383 aaPredicted RBP1.94□□□□□ -2.1
PMS1-203ENST00000409593 KCNJ16Q9NPI9 418 aa1.94□□□□□ -2.1
PMS1-203ENST00000409593 FAM49BQ9NUQ9 324 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms