RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 CDH20Q9HBT6 801 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 DCAF13Q9NV06 445 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 REV1Q9UBZ9 1251 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 EGFL7Q9UHF1 273 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 IGKV1D-43A0A0B4J1Z2 117 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 IQCMA0A1B0GVH7 501 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 A0A1W2PRQ8 180 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 A6NIZ1 184 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 M0R233 179 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 IGHV4-31P0DP07 118 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 GIFP27352 417 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 RAP1BP61224 184 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 RAP1AP62834 184 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 DGCR6Q14129 220 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 TBC1D28Q2M2D7 210 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 ZNF786Q8N393 782 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 PAQR4Q8N4S7 273 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 ZNF519Q8TB69 540 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 SLC7A13Q8TCU3 470 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 NSMAFQ92636 917 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 NABP1Q96AH0 204 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 TSPAN32Q96QS1 320 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 SYT3Q9BQG1 590 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 LRMDAQ9H2I8 198 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 NDUFAF4Q9P032 175 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 SAMD4AQ9UPU9 718 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 TMEM5Q9Y2B1 443 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 FAM32AQ9Y421 112 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 RTTNQ86VV8 2226 aa16.86■□□□□ 0.29
TSPAN4-209ENST00000409543 KIAA1324LA8MWY0 1029 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 CDC42EP2O14613 210 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 GMNNO75496 209 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 H1F0P07305 194 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 CCL2P13500 99 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 GPR4P46093 362 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 GZMKP49863 264 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 SGCAQ16586 387 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 ZBED5Q49AG3 693 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 FAM27BQ5VT28 67 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 LRP11Q86VZ4 500 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 ARIH2OSQ8N7S6 290 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 UBASH3BQ8TF42 649 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 C7orf34Q96L11 122 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 BPESC1Q9GZL8 116 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 TPK1Q9H3S4 243 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 GORASP2Q9H8Y8 452 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 CCNB1IP1Q9NPC3 277 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 DUSP13Q9UII6 198 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 FZR1Q9UM11 496 aa16.85■□□□□ 0.29
TSPAN4-209ENST00000409543 IGHV4-61A0A0C4DH41 118 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 FAM157BP0CG42 384 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 RHCEP18577 417 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 RAD52P43351 418 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 GYS2P54840 703 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 GNGT1P63211 74 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 HSF2Q03933 536 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 IQCCQ4KMZ1 466 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 PABPC1L2AQ5JQF8 200 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 RGS7BPQ6MZT1 257 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 PODNL1Q6PEZ8 512 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 PIGWQ7Z7B1 504 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 RNF148Q8N7C7 305 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 CLDN22Q8N7P3 220 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 CPEB3Q8NE35 698 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 TMEM160Q9NX00 188 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 MYEF2Q9P2K5 600 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 ARL2BPQ9Y2Y0 163 aa16.84■□□□□ 0.29
TSPAN4-209ENST00000409543 CD14P08571 375 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 APEHP13798 732 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 HSD17B1P14061 328 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF23P17027 643 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF26P17031 533 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF32P17041 273 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 APEX1P27695 318 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 APLNRP35414 380 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 RPL4P36578 427 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 GUCA1AP43080 201 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 ALDH3B1P43353 468 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 UCP2P55851 309 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 ERVK-25P63136 954 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 FOXL2NBQ6ZUU3 175 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 FAM86B1Q8N7N1 296 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 C11orf40Q8WZ69 217 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 BCL2L14Q9BZR8 327 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 NDEL1Q9GZM8 345 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 GRHPRQ9UBQ7 328 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 TAGLN3Q9UI15 199 aa16.83■□□□□ 0.28
TSPAN4-209ENST00000409543 A0A1W2PPW3 197 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 AHCYL1O43865 530 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 PTP4A3O75365 173 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 LCKP06239 509 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 CST2P09228 141 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF250P15622 560 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 ZNF16P17020 682 aaPredicted RBP16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 STOMP27105 288 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 LAP3P28838 519 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 LIMS1P48059 325 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 SELENOVP59797 346 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 PSG4Q00888 419 aa16.82■□□□□ 0.28
TSPAN4-209ENST00000409543 MAD2L1BPQ15013 274 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms