RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 OR2L13Q8N349 312 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 SIRT6Q8N6T7 355 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 AKR1E2Q96JD6 320 aa16.22■□□□□ 0.19
SMPD4-202ENST00000409031 NAA11Q9BSU3 229 aaPredicted RBP16.22■□□□□ 0.19
SMPD4-202ENST00000409031 BCORQ6W2J9 1755 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 A0A1W2PPV4 95 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 GLTPD2A6NH11 291 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 HPNP05981 417 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 ARRB1P49407 418 aaPredicted RBP16.21■□□□□ 0.19
SMPD4-202ENST00000409031 RAB11AP62491 216 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 ADIRFQ15847 76 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 C2orf76Q3KRA6 126 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 FJX1Q86VR8 437 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM151BQ8IW70 566 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 DUSP22Q9NRW4 184 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM30AQ9NV96 361 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 SELENOPP49908 381 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 SNU13P55769 128 aaKnown RBP16.21■□□□□ 0.19
SMPD4-202ENST00000409031 ZSCAN4Q8NAM6 433 aaPredicted RBP16.21■□□□□ 0.19
SMPD4-202ENST00000409031 C2orf50Q96LR7 162 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 SLC17A9Q9BYT1 436 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 OR10A2Q9H208 303 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 C1orf198Q9H425 327 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 PRKRAO75569 313 aaKnown RBP16.21■□□□□ 0.19
SMPD4-202ENST00000409031 SFTPDP35247 375 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 HBG1P69891 147 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 HBG2P69892 147 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 CST6Q15828 149 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 TMEM18Q96B42 140 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 KIRREL1Q96J84 757 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 TXN2Q99757 166 aa16.21■□□□□ 0.19
SMPD4-202ENST00000409031 COL22A1Q8NFW1 1626 aaPredicted RBP16.21■□□□□ 0.19
SMPD4-202ENST00000409031 HSPB2A8KAH6 182 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 ZNF264O43296 627 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 PEX11BO96011 259 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 HIST1H1CP16403 213 aaKnown RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 CSNK1G2P78368 415 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 CNN3Q15417 329 aaKnown RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 HSPB2Q16082 182 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 SLC36A2Q495M3 483 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MANEAQ5SRI9 462 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 TMEM184AQ6ZMB5 413 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 TMEM229BQ8NBD8 167 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 HGDQ93099 445 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 SGK3Q96BR1 496 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 SGCZQ96LD1 299 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 TIMM29Q9BSF4 260 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 VSX1Q9NZR4 365 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MIOXQ9UGB7 285 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 PLEKHM1Q9Y4G2 1056 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 LTBP3Q9NS15 1303 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 TRBV5-3A0A0A0MS03 114 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 H7BYZ3 331 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 GATCO43716 136 aaKnown RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 HOXB9P17482 250 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 FCRL6Q6DN72 434 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 OR1S2Q8NGQ3 325 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MED9Q9NWA0 146 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MTFP1Q9UDX5 166 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 PRAMEF27A3QJZ7 478 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 GPR31O00270 319 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 HNRNPA1L2Q32P51 320 aaKnown RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 PRAMEF9Q5VWM5 478 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MMP21Q8N119 569 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MUC20Q8N307 709 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 MS4A7Q9GZW8 240 aaPredicted RBP16.2■□□□□ 0.18
SMPD4-202ENST00000409031 ZNF750Q32MQ0 723 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 OVCH2Q7RTZ1 564 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 ZNF610Q8N9Z0 462 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 UBAC2Q8NBM4 344 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 OR10D4PQ8NGN7 298 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 OR10A5Q9H207 317 aa16.2■□□□□ 0.18
SMPD4-202ENST00000409031 SLC7A9P82251 487 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 OR51A4Q8NGJ6 313 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 FGGYQ96C11 551 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 RSPRY1Q96DX4 576 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 GNPNAT1Q96EK6 184 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-202ENST00000409031 SDF2Q99470 211 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 ZCCHC4Q9H5U6 513 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 DLX2Q07687 328 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-202ENST00000409031 DUSP8Q13202 625 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 Q3ZCU0 254 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 WDR5BQ86VZ2 330 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 ANGPTL5Q86XS5 388 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 ADOQ96SZ5 270 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 STACQ99469 402 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 C1QTNF6Q9BXI9 259 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 METTL9Q9H1A3 318 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 OR52A1Q9UKL2 312 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 C17orf105B2RV13 164 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 AP4M1O00189 453 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 GLSO94925 669 aaPredicted RBP16.19■□□□□ 0.18
SMPD4-202ENST00000409031 SCAF4O95104 1147 aaKnown RBP16.19■□□□□ 0.18
SMPD4-202ENST00000409031 AKR1C3P42330 323 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 DND1Q8IYX4 353 aaKnown RBP16.19■□□□□ 0.18
SMPD4-202ENST00000409031 OR1F2PQ96R84 312 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 CABLES2Q9BTV7 478 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 KCNIP1Q9NZI2 227 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 LCATP04180 440 aa16.19■□□□□ 0.18
SMPD4-202ENST00000409031 DVL1P1P54792 670 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms