RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF416Q9BWM5 594 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 BEX2Q9BXY8 128 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 MRPL37Q9BZE1 423 aaKnown RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF224Q9NZL3 707 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 ABCD2Q9UBJ2 740 aa7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 EIF3KQ9UBQ5 218 aaKnown RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 CGGBP1Q9UFW8 167 aaPredicted RBP7.83□□□□□ -1.16
SNORD88A-201ENST00000408314 LOC100289279A0A1B0GTE1 492 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 SH3PXD2BA1X283 911 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 C12orf71A8MTZ7 269 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 H3BSA7 217 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 GPRIN2O60269 458 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 LY6HO94772 140 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 LCKP06239 509 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 IGHV4-31P0DP07 118 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 DRD4P21917 467 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 ACHEP22303 614 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 GCH1P30793 250 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 RPL4P36578 427 aaKnown RBP7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 GDI2P50395 445 aaKnown RBP7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 SMIM11AP58511 58 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 CTXN1P60606 82 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 PSME3P61289 254 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 ZMAT1Q5H9K5 638 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 TMEM154Q6P9G4 183 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 TMPRSS11FQ6ZWK6 438 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 MBOAT2Q6ZWT7 520 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 VTCN1Q7Z7D3 282 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 PRIMA1Q86XR5 153 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 NRMQ8IXM6 262 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 CPEB3Q8NE35 698 aaKnown RBP7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 MOSPD2Q8NHP6 518 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 SYNPRQ8TBG9 265 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 RDH5Q92781 318 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 FOXN4Q96NZ1 517 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 ELAC2Q9BQ52 826 aaKnown RBP7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 BPESC1Q9GZL8 116 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 CHODLQ9H9P2 273 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 CYSLTR2Q9NS75 346 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 ADA2Q9NZK5 511 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 GRHPRQ9UBQ7 328 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 DUSP13Q9UII6 198 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 MAGEL2Q9UJ55 1249 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 NDRG4Q9ULP0 352 aaKnown RBP7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 ENPP4Q9Y6X5 453 aa7.82□□□□□ -1.16
SNORD88A-201ENST00000408314 A0A1W2PRQ8 180 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TMEM129A0AVI4 362 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 PLSCR5A0PG75 271 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 PIP5K1CO60331 668 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SLC2A10O95528 541 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 H1F0P07305 194 aaKnown RBP7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 CST2P09228 141 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TACSTD2P09758 323 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 RHCEP18577 417 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 MSR1P21757 451 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TUBG1P23258 451 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 STOMP27105 288 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 APEX1P27695 318 aaKnown RBP7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 THBS2P35442 1172 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 LIPAP38571 399 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 GPR6P46095 362 aaPredicted RBP7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 MNAT1P51948 309 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ARHGDIAP52565 204 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 UCP2P55851 309 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 MYBPC1Q00872 1141 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 RUNX1T1Q06455 604 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SCRN3Q0VDG4 424 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SCGB2A2Q13296 93 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 DGCR6Q14129 220 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SGCAQ16586 387 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SPATS1Q496A3 300 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ZBED5Q49AG3 693 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 PABPC1L2AQ5JQF8 200 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 FGD3Q5JSP0 725 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 FAM27BQ5VT28 67 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 GPR139Q6DWJ6 353 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 C8orf82Q6P1X6 216 aaPredicted RBP7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 PGM2L1Q6PCE3 622 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ZER1Q7Z7L7 766 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SYT9Q86SS6 491 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF584Q8IVC4 421 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 LRRC18Q8N456 261 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TEX29Q8N6K0 151 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ARIH2OSQ8N7S6 290 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 OR51A7Q8NH64 312 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 HDAC2Q92769 488 aaKnown RBP7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 MCUR1Q96AQ8 359 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ZNF570Q96NI8 536 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 SYT3Q9BQG1 590 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 FAM107BQ9H098 131 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TPK1Q9H3S4 243 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ELOVL3Q9HB03 270 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 HINT3Q9NQE9 182 aaKnown RBP7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TUBG2Q9NRH3 451 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 MAN2C1Q9NTJ4 1040 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 NKIRAS2Q9NYR9 191 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 RHCGQ9UBD6 479 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 AURKCQ9UQB9 309 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 TIMM10BQ9Y5J6 103 aa7.81□□□□□ -1.16
SNORD88A-201ENST00000408314 ATRQ13535 2644 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms