RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TRAV27A0A087WT01 109 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 SLC22A23A1A5C7 686 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 HTR3EA5X5Y0 456 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 HPXP02790 462 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 SAGP10523 405 aaPredicted RBP13.17□□□□□ -0.3
TPM1-207ENST00000403994 NAT2P11245 290 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 APEX1P27695 318 aaKnown RBP13.17□□□□□ -0.3
TPM1-207ENST00000403994 IFNA8P32881 189 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 GSK3BP49841 420 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 NUDT2P50583 147 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 KLF3P57682 345 aaPredicted RBP13.17□□□□□ -0.3
TPM1-207ENST00000403994 RPL27P61353 136 aaKnown RBP13.17□□□□□ -0.3
TPM1-207ENST00000403994 FHL1Q13642 323 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 LAPTM4AQ15012 233 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 TAF11Q15544 211 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 IGFN1Q86VF2 1251 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 OR13C2Q8NGS9 318 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 ZNF519Q8TB69 540 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 HPS1Q92902 700 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 TSPAN32Q96QS1 320 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 ALG12Q9BV10 488 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 FNDC11Q9BVV2 318 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 SIAEQ9HAT2 523 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 DUSP13Q9UII6 198 aa13.17□□□□□ -0.3
TPM1-207ENST00000403994 ZNF346Q9UL40 294 aaKnown RBP13.17□□□□□ -0.3
TPM1-207ENST00000403994 IGLV3-9A0A075B6K5 115 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 GMNCA6NCL1 334 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 PHF1O43189 567 aaPredicted RBP13.16□□□□□ -0.3
TPM1-207ENST00000403994 CCDC22O60826 627 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 PRSS23O95084 383 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 CLPTM1O96005 669 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 SERPINA1P01009 418 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 TGFAP01135 160 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 PTHP01270 115 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 ZNF250P15622 560 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 SRD5A1P18405 259 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 HSF2Q03933 536 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 PLP2Q04941 152 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 CCNIQ14094 377 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 TRAM2Q15035 370 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 ALKBH6Q3KRA9 238 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 PABPC1L2AQ5JQF8 200 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 FAM205BPQ63HN1 556 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 SLC25A47Q6Q0C1 308 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 HACD2Q6Y1H2 254 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 CBLL1Q75N03 491 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 PHC2Q8IXK0 858 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 LRRC75AQ8NAA5 344 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
TPM1-207ENST00000403994 OR1J2Q8NGS2 313 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 NSMAFQ92636 917 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 CCNB1IP1Q9NPC3 277 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 ABCD2Q9UBJ2 740 aa13.16□□□□□ -0.3
TPM1-207ENST00000403994 GSTA4O15217 222 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 MGRN1O60291 552 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 LCKP06239 509 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 ZNF32P17041 273 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 HNF1AP20823 631 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 ACHEP22303 614 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 APLNRP35414 380 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 CTXN1P60606 82 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 PRKCDQ05655 676 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 ZNF730Q6ZMV8 503 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 OAFQ86UD1 273 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 ICA1LQ8NDH6 482 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 OR51A7Q8NH64 312 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 SYNPRQ8TBG9 265 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 ACOT11Q8WXI4 607 aaPredicted RBP13.15□□□□□ -0.3
TPM1-207ENST00000403994 YIPF5Q969M3 257 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 HOPXQ9BPY8 73 aaPredicted RBP13.15□□□□□ -0.3
TPM1-207ENST00000403994 KCTD14Q9BQ13 255 aaPredicted RBP13.15□□□□□ -0.3
TPM1-207ENST00000403994 BCL2L14Q9BZR8 327 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 TAAR3PQ9P1P4 343 aa13.15□□□□□ -0.3
TPM1-207ENST00000403994 TANC2Q9HCD6 1990 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 A0A087WUU8 490 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 EFCAB9A8MZ26 197 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 H7C1C5 153 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 RP2O75695 350 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 STOMP27105 288 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 WNT5AP41221 380 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 GPR4P46093 362 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 SLC9A3P48764 834 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 CDH15P55291 814 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 UCP2P55851 309 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 LCN6P62502 163 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 ERVK-25P63136 954 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 MRPS11P82912 194 aaKnown RBP13.14□□□□□ -0.31
TPM1-207ENST00000403994 GLO1Q04760 184 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 SGCAQ16586 387 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 CR1LQ2VPA4 569 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 ANKDD1AQ495B1 522 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 FOXL2NBQ6ZUU3 175 aa13.14□□□□□ -0.31
TPM1-207ENST00000403994 MBOAT2Q6ZWT7 520 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms