RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 SPATA24Q86W54 205 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 MUC15Q8N387 334 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 CLDN22Q8N7P3 220 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 PAPD5Q8NDF8 572 aaKnown RBP12.4□□□□□ -0.42
HDDC2-202ENST00000398153 FANK1Q8TC84 345 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 Q96M85 177 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 TRAF4Q9BUZ4 470 aaPredicted RBP12.4□□□□□ -0.42
HDDC2-202ENST00000398153 DGCR6LQ9BY27 220 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 LRMDAQ9H2I8 198 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 ZNF442Q9H7R0 627 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 IL20Q9NYY1 176 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
HDDC2-202ENST00000398153 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 UGT2A1Q9Y4X1 527 aa12.4□□□□□ -0.42
HDDC2-202ENST00000398153 CELSR1Q9NYQ6 3014 aa12.4□□□□□ -0.43
HDDC2-202ENST00000398153 IGHV2OR16-5A0A0B4J2B6 119 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 ATP6V1G2-DDX39BF2Z307 99 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 SLC2A10O95528 541 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 CST2P09228 141 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 PTH2RP49190 550 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 PCBD1P61457 104 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 PLP2Q04941 152 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 PIGFQ07326 219 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 NPRL3Q12980 569 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
HDDC2-202ENST00000398153 MESTQ5EB52 335 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 CD300LDQ6UXZ3 194 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 THSD4Q6ZMP0 1018 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 RASSF6Q6ZTQ3 369 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 TGIF2LYQ8IUE0 185 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 OR52L1Q8NGH7 329 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 SH3GL3Q99963 347 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 RNF121Q9H920 327 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 CA10Q9NS85 328 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
HDDC2-202ENST00000398153 PRRC2AP48634 2157 aaKnown RBP12.39□□□□□ -0.43
HDDC2-202ENST00000398153 TEX13CA0A0J9YWL9 993 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 IQCMA0A1B0GVH7 501 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 GNGT2O14610 69 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 GASTP01350 101 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 CD8AP01732 235 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 MMP7P09237 267 aaPredicted RBP12.38□□□□□ -0.43
HDDC2-202ENST00000398153 ZNF35P13682 527 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 NOS3P29474 1203 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 CRABP1P29762 137 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 ADAM8P78325 824 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 FMODQ06828 376 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 DNM1P34Q6PK57 102 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 B3GLCTQ6Y288 498 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 ALDH16A1Q8IZ83 802 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 AQP11Q8NBQ7 271 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 NSMAFQ92636 917 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
HDDC2-202ENST00000398153 IFT27Q9BW83 186 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 CCNB1IP1Q9NPC3 277 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 BAIAP2Q9UQB8 552 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 CDH10Q9Y6N8 788 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 PMF1-BGLAPU3KQ54 211 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 ITPR3Q14573 2671 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 PLCE1Q9P212 2302 aa12.38□□□□□ -0.43
HDDC2-202ENST00000398153 IGKV1D-43A0A0B4J1Z2 117 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 C12orf71A8MTZ7 269 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 B9A039 149 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 KHDRBS3O75525 346 aaKnown RBP12.37□□□□□ -0.43
HDDC2-202ENST00000398153 SNAP29O95721 258 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 CELA3BP08861 270 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 MSR1P21757 451 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 NR4A1P22736 598 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 CALCRP30988 508 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 SERPINF1P36955 418 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 ARHGDIAP52565 204 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 RPS23P62266 143 aaKnown RBP12.37□□□□□ -0.43
HDDC2-202ENST00000398153 GALK2Q01415 458 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 DAG1Q14118 895 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 EFNB3Q15768 340 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 SGCAQ16586 387 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 C11orf71Q6IPW1 123 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 C1orf174Q8IYL3 243 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 LRRC18Q8N456 261 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 OR9Q2Q8NGE9 314 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 GIPC3Q8TF64 312 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 RASD2Q96D21 266 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 SAMD8Q96LT4 415 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 SEC61A2Q9H9S3 476 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 BARX1Q9HBU1 254 aaPredicted RBP12.37□□□□□ -0.43
HDDC2-202ENST00000398153 NOX3Q9HBY0 568 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 DNAJB9Q9UBS3 223 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 IL20RAQ9UHF4 553 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 U3KQV3 271 aa12.37□□□□□ -0.43
HDDC2-202ENST00000398153 H7C417 338 aa12.36□□□□□ -0.43
HDDC2-202ENST00000398153 EBAG9O00559 213 aa12.36□□□□□ -0.43
HDDC2-202ENST00000398153 SOCS2O14508 198 aa12.36□□□□□ -0.43
HDDC2-202ENST00000398153 FKBP6O75344 327 aa12.36□□□□□ -0.43
HDDC2-202ENST00000398153 PPP1R3DO95685 299 aa12.36□□□□□ -0.43
HDDC2-202ENST00000398153 RENP00797 406 aa12.36□□□□□ -0.43
HDDC2-202ENST00000398153 FOSL1P15407 271 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms