RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TMIGD3P0DMS9 266 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GP1BBP13224 206 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PGCP20142 388 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PLA2G7Q13093 441 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ETFDHQ16134 617 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ACKR1Q16570 336 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC22A10Q63ZE4 541 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR11H4Q8NGC9 324 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DUSP19Q8WTR2 217 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLITRK2Q9H156 845 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ASCC3Q8N3C0 2202 aaKnown RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 C2orf72A6NCS6 295 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZNF593O00488 134 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PTH2RP49190 550 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TMEM69Q5SWH9 247 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PIGKQ92643 395 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 S100A16Q96FQ6 103 aaKnown RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CMTM3Q96MX0 182 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NUDT22Q9BRQ3 303 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FGF21Q9NSA1 209 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 COPZ2Q9P299 210 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FOXJ3Q9UPW0 622 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KCNMB2Q9Y691 235 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CEP192Q8TEP8 1941 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TMED7-TICAM2A0A0A6YYA0 188 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TRBV5-5A0A0J9YX44 114 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NUDT21O43809 227 aaKnown RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CDK2P24941 298 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 S100A12P80511 92 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DYRK1AQ13627 763 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FAAP20Q6NZ36 180 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 BTN2A1Q7KYR7 527 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 MAMDC2Q7Z304 686 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 LRRTM1Q86UE6 522 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KDM8Q8N371 416 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 RBP7Q96R05 134 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 HRASLSQ9HDD0 168 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 HPF1Q9NWY4 346 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TMED7Q9Y3B3 224 aa16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KLF2Q9Y5W3 355 aaPredicted RBP16.55■□□□□ 0.24
CHRFAM7A-202ENST00000397827 A0A1B0GX78 115 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 EIF4E2O60573 245 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 MPC2O95563 127 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CFDP00746 253 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FREM3P0C091 2139 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 MAPK3P27361 379 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZNF81P51508 661 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CCR9P51686 369 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DMWDQ09019 674 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CBFBQ13951 182 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 MEP1BQ16820 701 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 THAP3Q8WTV1 239 aaPredicted RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PPP1R14AQ96A00 147 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR2M2Q96R28 347 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 C20orf85Q9H1P6 137 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZFP64Q9NPA5 681 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 A0A1W2PPL8 197 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ANXA2P2A6NMY6 339 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 TO15178 435 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC16A7O60669 478 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ANXA2P07355 339 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NUP54Q7Z3B4 507 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 DND1Q8IYX4 353 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OTOSQ8NHW6 89 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 RADILQ96JH8 1075 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NPAS1Q99742 590 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 C7orf50Q9BRJ6 194 aaKnown RBP16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 COMMD4Q9H0A8 199 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KLHL9Q9P2J3 617 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GTF2A1LQ9UNN4 478 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 B9D1Q9UPM9 204 aa16.54■□□□□ 0.24
CHRFAM7A-202ENST00000397827 A0A1W2PQD3 144 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GABARAPH6UMI1 98 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 HPXP02790 462 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KIR3DL2P43630 455 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 INSM1Q01101 510 aaPredicted RBP16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 EGR3Q06889 387 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 MELKQ14680 651 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 WDR38Q5JTN6 314 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FAM69AQ5T7M9 428 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SLC41A2Q96JW4 573 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 NKX3-1Q99801 234 aaPredicted RBP16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CDCP1Q9H5V8 836 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 RANBP3Q9H6Z4 567 aaPredicted RBP16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ELOVL3Q9HB03 270 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PRSS37A4D1T9 235 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KHDRBS3O75525 346 aaKnown RBP16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 KRT33AO76009 404 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 P2RX1P51575 399 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ART1P52961 327 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 PNLIPRP2P54317 469 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 SGCBQ16585 318 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 CD276Q5ZPR3 534 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR11G2Q8NGC1 345 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 OR56B4Q8NH76 319 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 FCAMRQ8WWV6 532 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 ZNF501Q96CX3 271 aaPredicted RBP16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 GSX2Q9BZM3 304 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 LDAHQ9H6V9 325 aa16.53■□□□□ 0.24
CHRFAM7A-202ENST00000397827 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms