RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 AQP12AQ8IXF9 295 aa13.75□□□□□ -0.21
CUX2-202ENST00000397643 GEMIN6Q8WXD5 167 aaKnown RBP13.75□□□□□ -0.21
CUX2-202ENST00000397643 TAAR8Q969N4 342 aa13.75□□□□□ -0.21
CUX2-202ENST00000397643 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
CUX2-202ENST00000397643 HSH2DQ96JZ2 352 aa13.75□□□□□ -0.21
CUX2-202ENST00000397643 IGKV1D-42A0A075B6H8 117 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 A0A0G2JMP0 313 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 A0A0X1KG70 313 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 M0R3H8 397 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 MPZL1O95297 269 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 B4GALT1P15291 398 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 GTF2E2P29084 291 aaKnown RBP13.74□□□□□ -0.21
CUX2-202ENST00000397643 GRPRP30550 384 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 PTDSS1P48651 473 aaKnown RBP13.74□□□□□ -0.21
CUX2-202ENST00000397643 RPS23P62266 143 aaKnown RBP13.74□□□□□ -0.21
CUX2-202ENST00000397643 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
CUX2-202ENST00000397643 MFSD13AQ14CX5 517 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 FAM69AQ5T7M9 428 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 CARD17Q5XLA6 110 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 ACSM5Q6NUN0 579 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 NHLRC1Q6VVB1 395 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 ZNF813Q6ZN06 617 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 ZNF771Q7L3S4 317 aaPredicted RBP13.74□□□□□ -0.21
CUX2-202ENST00000397643 VTCN1Q7Z7D3 282 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 COMTD1Q86VU5 262 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 SPATA24Q86W54 205 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 ADPRHL1Q8NDY3 354 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 OR4M2Q8NGB6 313 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 VANGL1Q8TAA9 524 aaPredicted RBP13.74□□□□□ -0.21
CUX2-202ENST00000397643 OPN4Q9UHM6 478 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 NOX1Q9Y5S8 564 aa13.74□□□□□ -0.21
CUX2-202ENST00000397643 VWFP04275 2813 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 ARHGAP32A7KAX9 2087 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 TCRBV5S2A0A599 114 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 AKAP8O43823 692 aaKnown RBP13.73□□□□□ -0.21
CUX2-202ENST00000397643 IFNW1P05000 195 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 HKR1P10072 659 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 ANPEPP15144 967 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 TNFRSF1BP20333 461 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 GIPRP48546 466 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 DEFA6Q01524 100 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 ALKBH6Q3KRA9 238 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 H1FNTQ75WM6 255 aaPredicted RBP13.73□□□□□ -0.21
CUX2-202ENST00000397643 RNF217Q8TC41 542 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 LRR1Q96L50 414 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 EMC6Q9BV81 110 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 TMEM27Q9HBJ8 222 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 RPS6KB2Q9UBS0 482 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 TESQ9UGI8 421 aaKnown RBP13.73□□□□□ -0.21
CUX2-202ENST00000397643 DUSP13Q9UII6 198 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 V9GYQ6 96 aa13.73□□□□□ -0.21
CUX2-202ENST00000397643 NOTCH1P46531 2555 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 A0A1W2PPW3 197 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 C17orf100A8MU93 164 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 MS4A18H0YCH9 400 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 J3QLI3 93 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 OR2T1O43869 369 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 CDC14BO60729 498 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 FMO6PO60774 539 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 BCL10O95999 233 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 UMPSP11172 480 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 HOXB6P17509 224 aaKnown RBP13.72□□□□□ -0.21
CUX2-202ENST00000397643 OR1E2P47887 323 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 RAB1AP62820 205 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 MVKQ03426 396 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 MS4A18Q3C1V0 323 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 FAM98BQ52LJ0 330 aaKnown RBP13.72□□□□□ -0.21
CUX2-202ENST00000397643 BPIFB2Q8N4F0 458 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 FAM86B1Q8N7N1 296 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 OR4D11Q8NGI4 311 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 OR6T1Q8NGN1 323 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 FGFBP3Q8TAT2 258 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 NANPQ8TBE9 248 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 DVL3Q92997 716 aaPredicted RBP13.72□□□□□ -0.21
CUX2-202ENST00000397643 SLC47A1Q96FL8 570 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 SLC41A3Q96GZ6 507 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 RSRC1Q96IZ7 334 aaKnown RBP13.72□□□□□ -0.21
CUX2-202ENST00000397643 TSPAN32Q96QS1 320 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 MCHR1Q99705 422 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 DENND2DQ9H6A0 471 aaPredicted RBP13.72□□□□□ -0.21
CUX2-202ENST00000397643 MAGIXQ9H6Y5 334 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 C12orf10Q9HB07 376 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 ZNF346Q9UL40 294 aaKnown RBP13.72□□□□□ -0.21
CUX2-202ENST00000397643 CORINQ9Y5Q5 1042 aa13.72□□□□□ -0.21
CUX2-202ENST00000397643 IGLV3-9A0A075B6K5 115 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 DHRS12A0PJE2 317 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 PRSS23O95084 383 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 CLPTM1O96005 669 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 CBLP22681 906 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 HTR2AP28223 471 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 IFNA8P32881 189 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 CCL8P80075 99 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 GALK2Q01415 458 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 ZP4Q12836 540 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 FOXL1Q12952 345 aa13.71□□□□□ -0.21
CUX2-202ENST00000397643 RAB39AQ14964 217 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms