RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 S100PBPQ96BU1 408 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 FBXO17Q96EF6 278 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 C14orf79Q96F83 325 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 BMFQ96LC9 184 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR14A2Q96R54 314 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 NMNAT3Q96T66 252 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TIMP4Q99727 224 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OCSTAMPQ9BR26 566 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 C1QTNF2Q9BXJ5 285 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TLNRD1Q9H1K6 362 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TMEM185BQ9H7F4 350 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 FAM60AQ9NP50 221 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 WBP1LQ9NX94 342 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 LAMP5Q9UJQ1 280 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 GNG8Q9UK08 70 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 SLCO1B1Q9Y6L6 691 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 MED12Q93074 2177 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 CDC14CA4D256 554 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RFPL4AA6NLU0 287 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RFPL4AL1F8VTS6 287 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 H7C1C5 153 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 AP4M1O00189 453 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 EIF4E2O60573 245 aaKnown RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 F12P00748 615 aaPredicted RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 IFNA10P01566 189 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 NQO2P16083 231 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 HIST1H1CP16403 213 aaKnown RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 NFYBP25208 207 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ITGA3P26006 1051 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 KIR2DL1P43626 348 aaPredicted RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 LUMP51884 338 aaPredicted RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 LCN6P62502 163 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 CXADRP78310 365 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 SORDQ00796 357 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 OC90Q02509 493 aaPredicted RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 POU4F2Q12837 409 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ITPRIPL2Q3MIP1 535 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ACSM3Q53FZ2 586 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 FCRL6Q6DN72 434 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 LINGO2Q7L985 606 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 LINC00471Q8N535 108 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 OR1J4Q8NGS1 313 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 HAVCR2Q8TDQ0 301 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 SNX33Q8WV41 574 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RSC1A1Q92681 617 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 WNT2BQ93097 391 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 GAL3ST3Q96A11 431 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 SLAMF9Q96A28 289 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 SLC25A28Q96A46 364 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RAB3CQ96E17 227 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RHOVQ96L33 236 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 DERL3Q96Q80 235 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 OR1F2PQ96R84 312 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 NEU1Q99519 415 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 TIMM29Q9BSF4 260 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 NDC1Q9BTX1 674 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RAB11FIP5Q9BXF6 653 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 EGLN1Q9GZT9 426 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 CHRDQ9H2X0 955 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 KIR3DX1Q9H7L2 352 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 AUNIPQ9H7T9 357 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 FKRPQ9H9S5 495 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 TRIM36Q9NQ86 728 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ABRACLQ9P1F3 81 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 MED31Q9Y3C7 131 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ZFHX4Q86UP3 3567 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 A0A1B0GTH9 108 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 A0A1W2PQF6 199 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 FAM86C2PA6NEL3 165 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ACOD1A6NK06 481 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ALG1L2C9J202 215 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 SYT5O00445 386 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 BHLHE40O14503 412 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 PLRG1O43660 514 aaKnown RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 IFNGP01579 166 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 MT-ND4LP03901 98 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 COX5BP10606 129 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 APEHP13798 732 aaKnown RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 RCC1P18754 421 aaPredicted RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 AGAP20933 346 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 MAOAP21397 527 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 NTSR1P30989 418 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 CSNK1EP49674 416 aaKnown RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 RP1P56715 2156 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 H2BFSP57053 126 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 RPS15AP62244 130 aaKnown RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 BTG2P78543 158 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 BDH1Q02338 343 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 PLAURQ03405 335 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 MPPED2Q15777 294 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ARHGAP11BQ3KRB8 267 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 HEPHL1Q6MZM0 1159 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 TMEM71Q6P5X7 295 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 TSSK4Q6SA08 328 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 MAMDC2Q7Z304 686 aaPredicted RBP4.57□□□□□ -1.68
SSR1-202ENST00000397511 ZNF546Q86UE3 836 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 TMEM200AQ86VY9 491 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 THNSL2Q86YJ6 484 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 PRSS58Q8IYP2 241 aa4.57□□□□□ -1.68
SSR1-202ENST00000397511 ZNF619Q8N2I2 560 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms