RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 APH1AQ96BI3 265 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 INTS14Q96SY0 518 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 SLCO5A1Q9H2Y9 848 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 IGSF10Q6WRI0 2623 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 DAPL1A0PJW8 107 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 PTHP01270 115 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 LCKP06239 509 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 NR2C1P13056 603 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 TUBA4AP68366 448 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 BLMHQ13867 455 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 C9orf135Q5VTT2 229 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 SEM1Q6ZVN7 128 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 LINGO2Q7L985 606 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 DPY19L4Q7Z388 723 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 TIGD4Q8IY51 512 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 FNDC8Q8TC99 324 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 SLC7A10Q9NS82 523 aa18.72■□□□□ 0.59
CPNE1-204ENST00000397443 CHCHD3Q9NX63 227 aaKnown RBP18.72■□□□□ 0.59
CPNE1-204ENST00000397443 A0A1W2PQL4 384 aaPredicted RBP18.71■□□□□ 0.59
CPNE1-204ENST00000397443 CENPBD1B2RD01 187 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 J3QRE1 110 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 SCG5P05408 212 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 TFAP2AP05549 437 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 SPARCP09486 303 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 PSKH1P11801 424 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 PCMT1P22061 227 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 LAP3P28838 519 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 CD79BP40259 229 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 FOXF2Q12947 444 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 XAF1Q6GPH4 301 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 DOLPP1Q86YN1 238 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 SVOPQ8N4V2 548 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 ACBD7Q8N6N7 88 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 SLC26A10Q8NG04 563 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 CDCA4Q9BXL8 241 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 EMC7Q9NPA0 242 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 ACOT13Q9NPJ3 140 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 COPS3Q9UNS2 423 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 ERGIC3Q9Y282 383 aa18.71■□□□□ 0.59
CPNE1-204ENST00000397443 CD8B2A6NJW9 211 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF593O00488 134 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-204ENST00000397443 MYL12BO14950 172 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 MAGEB4O15481 346 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-204ENST00000397443 DHHO43323 396 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 SS18L1O75177 396 aaPredicted RBP18.7■□□□□ 0.58
CPNE1-204ENST00000397443 IGHA1P01876 353 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 HSF2Q03933 536 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 SF3B4Q15427 424 aaKnown RBP eCLIP18.7■□□□□ 0.581e-7■■■■■ 40
CPNE1-204ENST00000397443 SGCAQ16586 387 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 OR2G6Q5TZ20 316 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 SSX6Q7RTT6 188 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 SLC16A9Q7RTY1 509 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 C11orf40Q8WZ69 217 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 VCX3AQ9NNX9 186 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 B3GAT2Q9NPZ5 323 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 ERVK13-1Q9NX77 482 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 PRSS50Q9UI38 385 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 INTS1Q8N201 2190 aaKnown RBP18.7■□□□□ 0.58
CPNE1-204ENST00000397443 ZFYVE26Q68DK2 2539 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 PSMD9O00233 223 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 INMTO95050 263 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 LIMS3P0CW19 117 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 LIMS4P0CW20 117 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 GAAP10253 952 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 ROR2Q01974 943 aaKnown RBP18.7■□□□□ 0.58
CPNE1-204ENST00000397443 IRF3Q14653 427 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 MED22Q15528 200 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 LINC00346Q8IVM7 164 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 OR5M11Q96RB7 305 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 TM9SF2Q99805 663 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 UPB1Q9UBR1 384 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 KLHDC2Q9Y2U9 406 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 EXOSC1Q9Y3B2 195 aaKnown RBP18.7■□□□□ 0.58
CPNE1-204ENST00000397443 EMC9Q9Y3B6 208 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 UGT2A1Q9Y4X1 527 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 SHANK1Q9Y566 2161 aa18.7■□□□□ 0.58
CPNE1-204ENST00000397443 ARHGAP21Q5T5U3 1957 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 TRIM64CA6NLI5 447 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 MRPS14O60783 128 aaKnown RBP18.69■□□□□ 0.58
CPNE1-204ENST00000397443 TOXO94900 526 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 EDN3P14138 238 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF823P16415 610 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 CEACAM16Q2WEN9 425 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 VWA1Q6PCB0 445 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 FAM214BQ7L5A3 538 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 OR10H5Q8NGA6 315 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 ALG8Q9BVK2 526 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 GPR35Q9HC97 309 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 GLRX2Q9NS18 164 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 KCNG2Q9UJ96 466 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 PCDHGB1Q9Y5G3 927 aa18.69■□□□□ 0.58
CPNE1-204ENST00000397443 HSMCR30P0CW71 290 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 PSMB9P28065 219 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 PTGER4P35408 488 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 GUCA1AP43080 201 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF84P51523 738 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 BLVRAP53004 296 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 NR1H2P55055 460 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 ZNF85Q03923 595 aa18.68■□□□□ 0.58
CPNE1-204ENST00000397443 RBPJQ06330 500 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms