RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PPIAL4FP0DN26 164 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 HKR1P10072 659 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 GPX2P18283 190 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 ADRA2CP18825 462 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 RAB6AP20340 208 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 MRPL19P49406 292 aaKnown RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SLC18A1P54219 525 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 UBA52P62987 128 aaKnown RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SLC3A1Q07837 685 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 ALKBH6Q3KRA9 238 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 GCNT6Q5T4J0 391 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 AVPI1Q5T686 147 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SLC2A7Q6PXP3 512 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 RBMS3Q6XE24 437 aaKnown RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 USP51Q70EK9 711 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SLC16A14Q7RTX9 510 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 ARMC8Q8IUR7 673 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 C1orf174Q8IYL3 243 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 PAQR4Q8N4S7 273 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 ANKRD42Q8N9B4 389 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 CPEB3Q8NE35 698 aaKnown RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 OR9I1Q8NGQ6 314 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 DVL3Q92997 716 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-208ENST00000397204 ELMOD3Q96FG2 381 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 TSPAN32Q96QS1 320 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 GPA33Q99795 319 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SLC6A7Q99884 636 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SH3GL3Q99963 347 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 ESM1Q9NQ30 184 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 TAS2R5Q9NYW4 299 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 SLC25A37Q9NYZ2 338 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 OPN4Q9UHM6 478 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 CORO2BQ9UQ03 480 aa7.44□□□□□ -1.22
CAPN3-208ENST00000397204 EVPLLA8MZ36 301 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 CENPBD1B2RD01 187 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 RNF13O43567 381 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 PRSS23O95084 383 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 MFN2O95140 757 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 HIST1H2ABP04908 130 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 GSTP1P09211 210 aaKnown RBP7.43□□□□□ -1.22
CAPN3-208ENST00000397204 PGA4P0DJD7 388 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 PGA3P0DJD8 388 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 CCL2P13500 99 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 LIPAP38571 399 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF81P51508 661 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF84P51523 738 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SCARB2Q14108 478 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 HIST3H3Q16695 136 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 TSTQ16762 297 aaKnown RBP7.43□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF718Q3SXZ3 478 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 CEP85LQ5SZL2 805 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 EPGNQ6UW88 154 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 UNQ6126/PRO20091Q6UXV3 157 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 HIST3H2AQ7L7L0 130 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SYT14Q8NB59 555 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 RBM15BQ8NDT2 890 aaKnown RBP7.43□□□□□ -1.22
CAPN3-208ENST00000397204 HIPK4Q8NE63 616 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 OR4K5Q8NGD3 323 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 CCL17Q92583 94 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 HIST1H2ACQ93077 130 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 MCHR1Q99705 422 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 WFDC6Q9BQY6 131 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SLC19A3Q9BZV2 496 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 EGLN1Q9GZT9 426 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 KCNN2Q9H2S1 579 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SAP30LQ9HAJ7 183 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SIAEQ9HAT2 523 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SLCO1B3Q9NPD5 702 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 NANSQ9NR45 359 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 CYSLTR2Q9NS75 346 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 SLAMF8Q9P0V8 285 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 PCDHGB1Q9Y5G3 927 aa7.43□□□□□ -1.22
CAPN3-208ENST00000397204 PLSCR5A0PG75 271 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 TMEM120BA0PK00 339 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 CHP2O43745 196 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 UBOX5O94941 541 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 TGDSO95455 350 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 CH25HO95992 272 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 IGHG1P01857 330 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ADH4P08319 380 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 VIMP08670 466 aaKnown RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MMP7P09237 267 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ASAH2BP0C7U1 165 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 PRTN3P24158 256 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 GSTT1P30711 240 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 GCH1P30793 250 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 APLNRP35414 380 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MMP15P51511 669 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 CLRN1P58418 232 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 STX1BP61266 288 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ERVS71-1P61550 626 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 ZNF74Q16587 644 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 DUSP7Q16829 419 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 TTC33Q6PID6 262 aaPredicted RBP7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MAVSQ7Z434 540 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 FUNDC1Q8IVP5 155 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 MSRB3Q8IXL7 192 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 C10orf111Q8N326 155 aa7.42□□□□□ -1.22
CAPN3-208ENST00000397204 OR1J1Q8NGS3 322 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms