RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OR1Q1Q15612 314 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 MAPK14Q16539 360 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 TEX30Q5JUR7 227 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 DHRS7BQ6IAN0 325 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 WBP2NLQ6ICG8 309 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 GSG1LQ6UXU4 331 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 GLDNQ6ZMI3 551 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 PRSS41Q7RTY9 318 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 C1orf210Q8IVY1 113 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 SAMD12Q8N8I0 201 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 FADS6Q8N9I5 356 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ZNF565Q8N9K5 539 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ELP5Q8TE02 316 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 GLYATL2Q8WU03 294 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ST8SIA1Q92185 356 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 DAZLQ92904 295 aaKnown RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 RBM14Q96PK6 669 aaKnown RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 FOXQ1Q9C009 403 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 FKRPQ9H9S5 495 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 NRIP3Q9NQ35 241 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 FLRT3Q9NZU0 649 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 MOKQ9UQ07 419 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 IGKV1D-42A0A075B6H8 117 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 IGHV5-10-1A0A0J9YXX1 117 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 A0A1B0GV90 55 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 A0A1W2PS29 197 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 MASP2O00187 686 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 NME6O75414 186 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 MT-ND4P03905 459 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 CD3GP09693 182 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 IFNGR1P15260 489 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 CELP19835 753 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 PRPS1P60891 318 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 PPP1CAP62136 330 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ACTC1P68032 377 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ACTA1P68133 377 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 DGCR2P98153 550 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ELFN2Q5R3F8 820 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 MRPL2Q5T653 305 aaKnown RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 FAM69AQ5T7M9 428 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 FCRLBQ6BAA4 426 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 SLC25A25Q6KCM7 469 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 JMJD6Q6NYC1 403 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 SMARCD3Q6STE5 483 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 IL20RBQ6UXL0 311 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 PXKQ7Z7A4 578 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 DTWD2Q8NBA8 298 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 PXT1Q8NFP0 134 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 BPIFCQ8NFQ6 507 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 OR9A4Q8NGU2 314 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 C16orf52Q8NHV5 167 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 TMEM239Q8WW34 195 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 PATE1Q8WXA2 126 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 THAP4Q8WY91 577 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 PNPLA2Q96AD5 504 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ARL5BQ96KC2 179 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 QRSL1Q9H0R6 528 aaKnown RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 AKAP7Q9P0M2 348 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 CCDC88CQ9P219 2028 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 MBD2Q9UBB5 411 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 CACNA1CQ13936 2221 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 A0A087WZY1 265 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 UNC119BA6NIH7 251 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 TMEM200CA6NKL6 621 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RHPN2P1A8MT19 583 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 EREGO14944 169 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RNF13O43567 381 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 DNPH1O43598 174 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OR10H3O60404 316 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 FCMRO60667 390 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RDH16O75452 317 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 ERAL1O75616 437 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 IGHV2-70P01814 119 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RLN2P04090 185 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 S100A9P06702 114 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 PTAFRP25105 342 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MPGP29372 298 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MNDAP41218 407 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 CASP9P55211 416 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 SOX8P57073 446 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 TAS2R43P59537 309 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 PITPNAQ00169 270 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 MAT1AQ00266 395 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 SNTB2Q13425 540 aaKnown RBP4.84□□□□□ -1.63
VPS41-203ENST00000395969 GINS1Q14691 196 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 Q3ZCU0 254 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 C10orf91Q5T1B1 145 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 ZNF626Q68DY1 528 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OR5M10Q6IEU7 315 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 ARHGAP11AQ6P4F7 1023 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 UNQ9370/PRO34162Q6UXP9 181 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 DEF8Q6ZN54 512 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 FOXL2NBQ6ZUU3 175 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 TPRA1Q86W33 373 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 TMEM17Q86X19 198 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 VRK2Q86Y07 508 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 LDLRAD3Q86YD5 345 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 OR6V1Q8N148 313 aa4.84□□□□□ -1.63
VPS41-203ENST00000395969 RCBTB1Q8NDN9 531 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms