RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CHST6Q9GZX3 395 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 SYT4Q9H2B2 425 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 UBQLN4Q9NRR5 601 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 KCNG2Q9UJ96 466 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 CLDN4O14493 209 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 GSG1LQ6UXU4 331 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 OVCH2Q7RTZ1 564 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 NAXDQ8IW45 347 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 METTL27Q8N6F8 245 aaPredicted RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 LHFPL5Q8TAF8 219 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 TSEN15Q8WW01 171 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 TAAR8Q969N4 342 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 SESN1Q9Y6P5 492 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 ALPK2Q86TB3 2170 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 A8MXK9 166 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 HPGDP15428 266 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 ATF4P18848 351 aaPredicted RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 HHEXQ03014 270 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 GK2Q14410 553 aaPredicted RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 C2orf76Q3KRA6 126 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 KIAA0895LQ68EN5 471 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 TAF8Q7Z7C8 310 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 PM20D2Q8IYS1 436 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 ZBTB44Q8NCP5 570 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 DVL3Q92997 716 aaPredicted RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 ZNF578Q96N58 590 aaPredicted RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 SHARPINQ9H0F6 387 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 CHRDQ9H2X0 955 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 APMAPQ9HDC9 416 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 EXOSC3Q9NQT5 275 aaKnown RBP16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 MED11Q9P086 117 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 PRELID1Q9Y255 219 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 TMEM14AQ9Y6G1 99 aa16.57■□□□□ 0.24
PCDHA1-202ENST00000394633 LGALS8O00214 317 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 TSPAN4O14817 238 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 ZNF264O43296 627 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 CD3DP04234 171 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 BTN1A1Q13410 526 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 MELKQ14680 651 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 ASPHD2Q6ICH7 369 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 TSSK4Q6SA08 328 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 TNFAIP8L1Q8WVP5 186 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 DNAJA3Q96EY1 480 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 NKX3-1Q99801 234 aaPredicted RBP16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 TMEM138Q9NPI0 162 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 PFDN2Q9UHV9 154 aa16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 CDV3Q9UKY7 258 aaKnown RBP16.56■□□□□ 0.24
PCDHA1-202ENST00000394633 OR5K4A6NMS3 321 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 TEX46H3BTG2 121 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 PDGFBP01127 241 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 TACR3P29371 465 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 CCKBRP32239 447 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 PRSS3P35030 304 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 EIF2B5Q13144 721 aaKnown RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 RAB11BQ15907 218 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 KRT77Q7Z794 578 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 PARGQ86W56 976 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 ZNF321PQ8N8H1 164 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 CLEC1AQ8NC01 280 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 OR8S1Q8NH09 359 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 OTOSQ8NHW6 89 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 FAM3DQ96BQ1 224 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 ELOVL3Q9HB03 270 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 PRODH2Q9UF12 536 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC22A23A1A5C7 686 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 BLACEA4D250 179 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 HSPB2A8KAH6 182 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC17A2O00624 439 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 SCDO00767 359 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 CDC40O60508 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 RAD1O60671 282 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 SRPX2O60687 465 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 UTS2O95399 124 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 WNT11O96014 354 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 C1orf61Q13536 156 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 MPPED2Q15777 294 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 HSPB2Q16082 182 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 ZNF660Q6AZW8 331 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 STEAP1BQ6NZ63 245 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 FDX2Q6P4F2 183 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 ST8SIA4Q92187 359 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 CLDN23Q96B33 292 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 NECAB3Q96P71 396 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 MS4A7Q9GZW8 240 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 EXO5Q9H790 373 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 GMEB2Q9UKD1 530 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC22A13Q9Y226 551 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 TMEM184BQ9Y519 407 aaPredicted RBP16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 THADAQ6YHU6 1953 aa16.55■□□□□ 0.24
PCDHA1-202ENST00000394633 LOC100289279A0A1B0GTE1 492 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 KRBOX1C9JBD0 128 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 PHYHO14832 338 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 NSA2O95478 260 aaKnown RBP16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 IL33O95760 270 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 FGF2P09038 288 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 FAM166AQ6J272 317 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 SLC35D2Q76EJ3 337 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 OR1S1Q8NH92 325 aa16.54■□□□□ 0.24
PCDHA1-202ENST00000394633 ZNF563Q8TA94 476 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms