RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 MCRIP1C9JLW8 97 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 KLF4O43474 513 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 FADS1O60427 444 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 HTR3BO95264 441 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 POU3F1Q03052 451 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 FGL1Q08830 312 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 ACKR1Q16570 336 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TMEM225Q6GV28 225 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 PRSS42Q7Z5A4 293 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 DCBLD2Q96PD2 775 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 VRK1Q99986 396 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TINAGL1Q9GZM7 467 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 PCDHB16Q9NRJ7 776 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 DZANK1Q9NVP4 752 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 MKI67P46013 3256 aaKnown RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 CYR61O00622 381 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TOR1AO14656 332 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 LINC01565O15544 149 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 SEC14L5O43304 696 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 NDUFB6O95139 128 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 IGKV1D-16P01601 117 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 S100A6P06703 90 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 RRASP10301 218 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 SLC2A1P11166 492 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 ENPP1P22413 925 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 ACAA2P42765 397 aaKnown RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 TLE3Q04726 772 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 RIN1Q13671 783 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 HLXQ14774 488 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 FAM160A2Q8N612 972 aaPredicted RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 ZNRF4Q8WWF5 429 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 EMC6Q9BV81 110 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 SEMA6CQ9H3T2 930 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 HAO2Q9NYQ3 351 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 FRRS1LQ9P0K9 344 aa14.66□□□□□ -0.06
PCDH1-203ENST00000394536 MRM2Q9UI43 246 aaKnown RBP14.66□□□□□ -0.06
PCDH1-203ENST00000394536 A0A087WV48 116 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 LOC100289279A0A1B0GTE1 492 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 F8W036 122 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 PRAMEF26H0Y7S4 382 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 PHYHO14832 338 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 PIN1P1O15428 100 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 BLOC1S1P78537 153 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 TMEM255AQ5JRV8 349 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 GABRG1Q8N1C3 465 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 EID2Q8N6I1 236 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 CCDC74AQ96AQ1 378 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 PHB2Q99623 299 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 PCDHGA9Q9Y5G4 932 aaKnown RBP14.65□□□□□ -0.06
PCDH1-203ENST00000394536 KNG1P01042 644 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 RAG2P55895 527 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 SLC51BQ86UW2 128 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 OR4D10Q8NGI6 311 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 FGGYQ96C11 551 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 EMC3Q9P0I2 261 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 A0A0G2JK05 382 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 LINC00862A6NCI5 91 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 DCTN6O00399 190 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 SMCO1Q147U7 214 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 SLC9A3R2Q15599 337 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 TUSC1Q2TAM9 212 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF283Q8N7M2 679 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 ANKRD9Q96BM1 317 aaPredicted RBP14.65□□□□□ -0.06
PCDH1-203ENST00000394536 SLC41A2Q96JW4 573 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 PBX4Q9BYU1 374 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 NKX2-4Q9H2Z4 354 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 APMAPQ9HDC9 416 aa14.65□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF701Q9NV72 531 aaPredicted RBP14.65□□□□□ -0.06
PCDH1-203ENST00000394536 IGHV3-20A0A0C4DH32 117 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 MEGF11A6BM72 1044 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 SUSD5O60279 629 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 GLSO94925 669 aaPredicted RBP14.64□□□□□ -0.07
PCDH1-203ENST00000394536 TRAPPC6BQ86SZ2 158 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 PXT1Q8NFP0 134 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 GPR119Q8TDV5 335 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ST6GALNAC5Q9BVH7 336 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 CHST6Q9GZX3 395 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 SCML1Q9UN30 329 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 A0A1B0GV50 99 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF726A6NNF4 738 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ARPC3O15145 178 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 XRCC3O43542 346 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ADAM11O75078 769 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 CD1CP29017 333 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 BTCP35070 178 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 EFNB2P52799 333 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 UBXN2BQ14CS0 331 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ELOCQ15369 112 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 CD226Q15762 336 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 SGCAQ16586 387 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF74Q16587 644 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 VWA2Q5GFL6 755 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 PXKQ7Z7A4 578 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 OR5D18Q8NGL1 313 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 CST11Q9H112 138 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF169Q14929 603 aaPredicted RBP14.64□□□□□ -0.07
PCDH1-203ENST00000394536 ETFDHQ16134 617 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 SLC22A6Q4U2R8 563 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 WDR38Q5JTN6 314 aa14.64□□□□□ -0.07
PCDH1-203ENST00000394536 MDGA2Q7Z553 956 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms