RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 RNLSQ5VYX0 342 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 C12orf73Q69YU5 71 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 RPUSD3Q6P087 351 aaKnown RBP7□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF836Q6ZNA1 936 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 HMGN2P46Q86SG4 172 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 TTC9BQ8N6N2 239 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 LFNGQ8NES3 379 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 OR13C3Q8NGS6 347 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 OR5R1Q8NH85 324 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 TMEM19Q96HH6 336 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 CD180Q99467 661 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 ALKBH7Q9BT30 221 aaPredicted RBP7□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF426Q9BUY5 554 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 SOHLH2Q9NX45 425 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 FKBP11Q9NYL4 201 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 P2RX2Q9UBL9 471 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 TMED3Q9Y3Q3 217 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 NRXN2Q9P2S2 1712 aa7□□□□□ -1.29
VTI1A-201ENST00000393077 SERPINA7P05543 415 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CR2P20023 1033 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CHRNB4P30926 498 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CTHP32929 405 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 RBMXP38159 391 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 OR3A2P47893 321 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 MEF2DQ14814 521 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF66Q6ZN08 573 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CLDN19Q8N6F1 224 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 OR5AP2Q8NGF4 316 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LCN9Q8WX39 176 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 PIK3IP1Q96FE7 263 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SERINC2Q96SA4 455 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SEMA6CQ9H3T2 930 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 IGFLR1Q9H665 355 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CERS4Q9HA82 394 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 HCSTQ9UBK5 93 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CHRNA9Q9UGM1 479 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 GPR34Q9UPC5 381 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SLC38A8A6NNN8 435 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 A8MWP6 167 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 H7BY64 318 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SOCS6O14544 535 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 OR1F1O43749 312 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 DNAJB6O75190 326 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 GUSBP08236 651 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 RHOQP17081 205 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ADCYAP1P18509 176 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ACAA2P42765 397 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CTSOP43234 321 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SLC6A11P48066 632 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 PXNP49023 591 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LMAN2Q12907 356 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 RTL6Q6ICC9 239 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 FBXL22Q6P050 247 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 KLHL24Q6TFL4 600 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LRRC70Q7Z2Q7 622 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LMNTD1Q8N9Z9 388 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 DMBX1Q8NFW5 382 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 OR4D9Q8NGE8 314 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 MOAP1Q96BY2 351 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 DERL3Q96Q80 235 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 TUBA4BQ9H853 241 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LYRM2Q9NU23 88 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 FBXO4Q9UKT5 387 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 EXOGQ9Y2C4 368 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LSM5Q9Y4Y9 91 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ANKRD20A5PA0PJZ0 165 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SAP18O00422 153 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 MAN2B1O00754 1011 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 GPR37L1O60883 481 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 TOX4O94842 621 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 RCBTB2O95199 551 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 IGHV2-5P01817 119 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 IGHEP01854 428 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 TACSTD2P09758 323 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 NID1P14543 1247 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 GALP22466 123 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 MMP11P24347 488 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 WNT3P56703 355 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 RPL23AP62750 156 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SNRPNP63162 240 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SIM1P81133 766 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ARHGAP19Q14CB8 494 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 PRAMEF20Q5VT98 475 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 TMEM108Q6UXF1 575 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SERPINA9Q86WD7 417 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LAS2Q8IYD9 372 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LINC01465Q8N7H1 131 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ZNF738Q8NE65 137 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 OR56B2PQ8NGI1 322 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 OR6N1Q8NGY5 312 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 CD200R1Q8TD46 325 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 KHSRPQ92945 711 aaKnown RBP eCLIP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 MCHR2Q969V1 340 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 LCORQ96JN0 433 aaPredicted RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 SAMD8Q96LT4 415 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 MS4A10Q96PG2 267 aa6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ISG20L2Q9H9L3 353 aaKnown RBP6.99□□□□□ -1.29
VTI1A-201ENST00000393077 ZFP37Q9Y6Q3 630 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms