RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SLC2A1P11166 492 aa12.04□□□□□ -0.48
LCA5-202ENST00000392959 HIST1H1CP16403 213 aaKnown RBP12.04□□□□□ -0.48
LCA5-202ENST00000392959 DCDP81605 110 aaKnown RBP12.04□□□□□ -0.48
LCA5-202ENST00000392959 SYS1Q8N2H4 156 aa12.04□□□□□ -0.48
LCA5-202ENST00000392959 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
LCA5-202ENST00000392959 TAS2R5Q9NYW4 299 aa12.04□□□□□ -0.48
LCA5-202ENST00000392959 CBR1P16152 277 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 IRS1P35568 1242 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SNCAP37840 140 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 HCCSP53701 268 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 F2RL1P55085 397 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 BDH1Q02338 343 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 TIGD3Q6B0B8 471 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 RABEPKQ7Z6M1 372 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 GJC3Q8NFK1 279 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 MBNL1Q9NR56 388 aaKnown RBP12.03□□□□□ -0.48
LCA5-202ENST00000392959 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SLC23A2Q9UGH3 650 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 ARRDC5A6NEK1 342 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 CLDN1O95832 211 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SPI1P17947 270 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 MCCD1P59942 119 aaPredicted RBP12.03□□□□□ -0.48
LCA5-202ENST00000392959 TMEM41BQ5BJD5 291 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 TMEM217Q8N7C4 229 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SLC37A2Q8TED4 501 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SLC25A19Q9HC21 320 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 H3BNC9 293 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 PTGER4P35408 488 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 DPTQ07507 201 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 DUSP8Q13202 625 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 NUMBLQ9Y6R0 609 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 ATP6V1G2-DDX39BF2Z307 99 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 HOXC11O43248 304 aaPredicted RBP12.03□□□□□ -0.48
LCA5-202ENST00000392959 TSPAN12O95859 305 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SSR4P51571 173 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 OR10K2Q6IF99 312 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 KCNRGQ8N5I3 272 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 NXPE3Q969Y0 559 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 SEH1LQ96EE3 360 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 WWTR1Q9GZV5 400 aa12.03□□□□□ -0.48
LCA5-202ENST00000392959 TRBV5-4A0A0C4DH59 114 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 G3V3Y1 287 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 AIPO00170 330 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 TNFRSF10CO14798 259 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 ETHE1O95571 254 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 RAB4AP20338 218 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 PHLDA2Q53GA4 152 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 WBP2Q969T9 261 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 LRFN5Q96NI6 719 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 SPHK1Q9NYA1 384 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 KNTC1P50748 2209 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 NINQ8N4C6 2090 aa12.02□□□□□ -0.48
LCA5-202ENST00000392959 TMX2-CTNND1H3BSU7 103 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 M0R082 166 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 OR2F2O95006 317 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 POU3F3P20264 500 aaPredicted RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 GABRA2P47869 451 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 LBX1P52954 281 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 OR2F1Q13607 317 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 GLYR1Q49A26 553 aaPredicted RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 ADAM5Q6NVV9 412 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 ZNF813Q6ZN06 617 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 NAXDQ8IW45 347 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 SUMF1Q8NBK3 374 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 DMBX1Q8NFW5 382 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 OR13H1Q8NG92 308 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 LIPHQ8WWY8 451 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 RAB39BQ96DA2 213 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 DAZAP1Q96EP5 407 aaKnown RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 TBC1D29Q9UFV1 150 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 B3GALT5Q9Y2C3 310 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 DNAJC13O75165 2243 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 MDFIC2A0A1B0GVS7 189 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 LOC107986453A0A1B0GWG9 222 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 OR5K3A6NET4 321 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 C17orf112F2Z3M2 114 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 SOD1P00441 154 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 ZNF133P52736 654 aaPredicted RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 SCGB2A2Q13296 93 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 HNF4GQ14541 408 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 CTF1Q16619 201 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 PXDC1Q5TGL8 231 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 OR51A4Q8NGJ6 313 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 BTF3L4Q96K17 158 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 BANF2Q9H503 90 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 EXOSC3Q9NQT5 275 aaKnown RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 PISDQ9UG56 409 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 A0A0A6YYJ9 748 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 FGF17O60258 216 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 MAGEB1P43366 347 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 RFX2P48378 723 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 CLDN20P56880 219 aa12.02□□□□□ -0.49
LCA5-202ENST00000392959 GRB2P62993 217 aaKnown RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 ELAVL1Q15717 326 aaKnown RBP12.02□□□□□ -0.49
LCA5-202ENST00000392959 LTC4SQ16873 150 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms