RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SMIM4Q8WVI0 70 aa22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 C5orf34Q96MH7 638 aa22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 MRI1Q9BV20 369 aa22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 AUNIPQ9H7T9 357 aa22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 MED29Q9NX70 200 aa22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 NXT1Q9UKK6 140 aaKnown RBP22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 SLC22A13Q9Y226 551 aa22.96■■□□□ 1.27
SMARCD3-203ENST00000392811 MAS1P04201 325 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 CCL4P13236 92 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 TCEA1P23193 301 aaKnown RBP22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 PTGS2P35354 604 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 DUSP3P51452 185 aaPredicted RBP22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 MDGA2Q7Z553 956 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 C1orf210Q8IVY1 113 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 MCHR2Q969V1 340 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 ZC3H10Q96K80 434 aaKnown RBP22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 KCNK17Q96T54 332 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 OR2B2Q9GZK3 357 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 ALKBH4Q9NXW9 302 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 CACNA1CQ13936 2221 aa22.95■■□□□ 1.26
SMARCD3-203ENST00000392811 LOC102723996A0A087X1L8 192 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 NPIPB13A6NJU9 1138 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 NPIPB4C9JG80 1138 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 MAP2K6P52564 334 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 BTG1P62324 171 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 IFITM2Q01629 132 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 OR7E24Q6IFN5 339 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 TMPRSS12Q86WS5 348 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 SERPINA12Q8IW75 414 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 ZNF454Q8N9F8 522 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 SLC26A10Q8NG04 563 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 PPP1R14AQ96A00 147 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 FAM210AQ96ND0 272 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 TP63Q9H3D4 680 aaPredicted RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 RABL2AQ9UBK7 228 aaPredicted RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 GTF2A1LQ9UNN4 478 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 RABL2BQ9UNT1 228 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 ANXA2P2A6NMY6 339 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 ANXA2P07355 339 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 ZFP36L1Q07352 338 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 MFGE8Q08431 387 aaPredicted RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 LINGO2Q7L985 606 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 DND1Q8IYX4 353 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 OR2M3Q8NG83 312 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 OR52N5Q8NH56 324 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 SYNPRQ8TBG9 265 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 TSEN15Q8WW01 171 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 MR1Q95460 341 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 GTPBP2Q9BX10 602 aaKnown RBP22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 DPAGT1Q9H3H5 408 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 FBXL2Q9UKC9 423 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 LRP12Q9Y561 859 aa22.94■■□□□ 1.26
SMARCD3-203ENST00000392811 FREM3P0C091 2139 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 CELA2AP08217 269 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 RIDAP52758 137 aaKnown RBP22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 C19orf57Q0VDD7 668 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 MYBPHQ13203 477 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 TRA2AQ13595 282 aaKnown RBP eCLIP22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 DNM1P34Q6PK57 102 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 B3GALT5Q9Y2C3 310 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 RALGAPA1Q6GYQ0 2036 aa22.93■■□□□ 1.26
SMARCD3-203ENST00000392811 IGKV1D-43A0A0B4J1Z2 117 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 RAD1O60671 282 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 KLK3P07288 261 aaPredicted RBP22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 UMODP07911 640 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 HOXD12P35452 270 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 KLF9Q13886 244 aaPredicted RBP22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 FAM198BQ6UWH4 519 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 OR5M1Q8NGP8 315 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 RNF170Q96K19 258 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 COL6A3P12111 3177 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 ZNF823P16415 610 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 FOXK1P85037 733 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 SF3B4Q15427 424 aaKnown RBP eCLIP22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 FAM205BPQ63HN1 556 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 GCDHQ92947 438 aaPredicted RBP22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 S100A16Q96FQ6 103 aaKnown RBP22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 SERINC1Q9NRX5 453 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 NUDT15Q9NV35 164 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 FOXJ3Q9UPW0 622 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 PTRH2Q9Y3E5 179 aaKnown RBP22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 ETV7Q9Y603 341 aa22.92■■□□□ 1.26
SMARCD3-203ENST00000392811 H0YC42 278 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 OPN1LWP04000 364 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 RAB40ALP0C0E4 278 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 GDNFP39905 211 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 RRAS2P62070 204 aaPredicted RBP22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 RAB40AQ8WXH6 277 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 MIB2Q96AX9 1013 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 TMEM185BQ9H7F4 350 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 FANCFQ9NPI8 374 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 TRAV6A0A075B6T7 132 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 IGHV1-45A0A0A0MS14 117 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 TEX51A0A1B0GUA7 166 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 A0A1W2PNV4 684 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 GIFP27352 417 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 ART1P52961 327 aa22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 RPS15P62841 145 aaKnown RBP22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 MRPS15P82914 257 aaKnown RBP22.91■■□□□ 1.26
SMARCD3-203ENST00000392811 MC2RQ01718 297 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms