RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IGKV1D-8A0A087WSZ0 117 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 A0A1B0GUH1 482 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 A0A1W2PPV4 95 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF233A6NK53 670 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PDZK1P1A8MUH7 402 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 A8MUI8 341 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 EIF3HO15372 352 aaKnown RBP eCLIP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ABCC4O15439 1325 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 RNF13O43567 381 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CHMP2AO43633 222 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 KDELR3O43731 214 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 UPK3AO75631 287 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 SEMA3DO95025 777 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CCNB2O95067 398 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 LCA5LO95447 670 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 MBP02144 154 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 INSRP06213 1382 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PNMTP11086 282 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 NQO2P16083 231 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TNNI3P19429 210 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ATP6V1B2P21281 511 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 NT5EP21589 574 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CFL1P23528 166 aaKnown RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 MSNP26038 577 aaKnown RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 DPP4P27487 766 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CHI3L1P36222 383 aaPredicted RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 FDFT1P37268 417 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ACADVLP49748 655 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 RGS4P49798 205 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 RAB9AP51151 201 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 BCAP31P51572 246 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CCNG1P51959 295 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 EMP2P54851 167 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 YWHAGP61981 247 aaKnown RBP eCLIP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CBX1P83916 185 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CNTN2Q02246 1040 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 DGCR6Q14129 220 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 RCAN2Q14206 197 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PIGHQ14442 188 aaPredicted RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ALX1Q15699 326 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 SGCAQ16586 387 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TPD52L1Q16890 204 aaPredicted RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 EXOC3L2Q2M3D2 409 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ALKBH6Q3KRA9 238 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TTMPQ5BVD1 217 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM31Q5JXX7 168 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CDKL4Q5MAI5 379 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PDZK1Q5T2W1 519 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TTC23Q5W5X9 447 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CCDC137Q6PK04 289 aaKnown RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM220Q6QAJ8 160 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TMIGD1Q6UXZ0 262 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PRSS41Q7RTY9 318 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 APTXQ7Z2E3 356 aaKnown RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ERASQ7Z444 233 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 DCXRQ7Z4W1 244 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 AKAP14Q86UN6 197 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PAQR7Q86WK9 346 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ST13P4Q8IZP2 240 aaPredicted RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 SELENOHQ8IZQ5 122 aaKnown RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 LIX1Q8N485 282 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 C15orf54Q8N8G6 183 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TTLQ8NG68 377 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 OR7G1Q8NGA0 311 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 OR5AU1Q8NGC0 362 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 OR51G2Q8NGK0 314 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 LRRC20Q8TCA0 184 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 GPX8Q8TED1 209 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 FCGR1BQ92637 280 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TESK2Q96S53 571 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 NPAS2Q99743 824 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 SELENOSQ9BQE4 189 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TMEM43Q9BTV4 400 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ANGPTL4Q9BY76 406 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PARD6GQ9BYG4 376 aaPredicted RBP1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ANKRD60Q9BZ19 345 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 IL22Q9GZX6 179 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 WDR76Q9H967 626 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF160Q9HCG1 818 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 POLD4Q9HCU8 107 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 NT5MQ9NPB1 228 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 C8orf4Q9NR00 106 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CHRAC1Q9NRG0 131 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 RDH8Q9NYR8 311 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 AHSPQ9NZD4 102 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 PISDQ9UG56 409 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 ZNF229Q9UJW7 825 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 CDH9Q9ULB4 789 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TBC1D24Q9ULP9 559 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 FOXJ3Q9UPW0 622 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 NINLQ9Y2I6 1382 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 LRRC42Q9Y546 428 aa1.53□□□□□ -2.16
TRAV40-201ENST00000390467 TET2Q6N021 2002 aaPredicted RBP1.52□□□□□ -2.17
TRAV40-201ENST00000390467 BRWD3Q6RI45 1802 aa1.52□□□□□ -2.17
TRAV40-201ENST00000390467 PEG3Q9GZU2 1588 aa1.52□□□□□ -2.17
TRAV40-201ENST00000390467 PDS5BQ9NTI5 1447 aa1.52□□□□□ -2.17
TRAV40-201ENST00000390467 KANK1Q14678 1352 aa1.52□□□□□ -2.17
TRAV40-201ENST00000390467 MROH7-TTC4A0A0A0MT08 1334 aa1.52□□□□□ -2.17
TRAV40-201ENST00000390467 FRMPD4Q14CM0 1322 aa1.52□□□□□ -2.17
TRAV40-201ENST00000390467 A0A0G2JN53 185 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms