RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PLEKHA8Q96JA3 519 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 RDH12Q96NR8 316 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 WFIKKN1Q96NZ8 548 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 SLC38A2Q96QD8 506 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 SEC61A2Q9H9S3 476 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 COA3Q9Y2R0 106 aaPredicted RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 HECTD1Q9ULT8 2610 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 LOC100130705A0A1B0GUX0 176 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 A0A1W2PPL8 197 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 A0A1W2PR80 420 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 OR5H1A6NKK0 313 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 TLX2O43763 284 aaPredicted RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 KHDRBS3O75525 346 aaKnown RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 THBDP07204 575 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 SPI1P17947 270 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 GGT2P36268 569 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 SLC25A1P53007 311 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 MRPS34P82930 218 aaKnown RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 TBRG1Q3YBR2 411 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 PLBD1Q6P4A8 553 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 KLHL24Q6TFL4 600 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 GLB1L2Q8IW92 636 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 DMRTC2Q8IXT2 367 aaPredicted RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 SLC22A24Q8N4F4 322 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 WDR31Q8NA23 367 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 ACBD4Q8NC06 268 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 OR51L1Q8NGJ5 315 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 UBE2FQ969M7 185 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 NABP1Q96AH0 204 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 OTULINQ96BN8 352 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 IL4I1Q96RQ9 567 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 SH3GL3Q99963 347 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 RACGAP1Q9H0H5 632 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 OR10A4Q9H209 315 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 HINT3Q9NQE9 182 aaKnown RBP11.09□□□□□ -0.63
SMN1-202ENST00000380707 SLC17A5Q9NRA2 495 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 FKBP7Q9Y680 259 aa11.09□□□□□ -0.63
SMN1-202ENST00000380707 PRR14LQ5THK1 2151 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 ZNF503-AS2A6NEH8 195 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 TUBAL3A6NHL2 446 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 PRR23D1E9PI22 279 aaPredicted RBP11.08□□□□□ -0.64
SMN1-202ENST00000380707 SLC16A6O15403 523 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 MPZL1O95297 269 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 PRR23D2P0DMB1 279 aaPredicted RBP11.08□□□□□ -0.64
SMN1-202ENST00000380707 PAICSP22234 425 aaKnown RBP11.08□□□□□ -0.64
SMN1-202ENST00000380707 LAP3P28838 519 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 PYCR1P32322 319 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 TAB1Q15750 504 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 SGCAQ16586 387 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 TIMM23BQ5SRD1 257 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 OTPQ5XKR4 325 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 DNM1P34Q6PK57 102 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 FOXL2NBQ6ZUU3 175 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 BCDIN3DQ7Z5W3 292 aaKnown RBP11.08□□□□□ -0.64
SMN1-202ENST00000380707 SKA3Q8IX90 412 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 C17orf78Q8N4C9 275 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 PROKR2Q8NFJ6 384 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 BBS1Q8NFJ9 593 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 OR2T4Q8NH00 348 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 OR52N5Q8NH56 324 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 FAM81AQ8TBF8 368 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 HSD17B8Q92506 261 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 ZC3HAV1LQ96H79 300 aaKnown RBP11.08□□□□□ -0.64
SMN1-202ENST00000380707 PITX2Q99697 317 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 MED18Q9BUE0 208 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 PRRG3Q9BZD7 231 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 VCXQ9H320 206 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 ZNF224Q9NZL3 707 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 NDRG3Q9UGV2 375 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 GMPPBQ9Y5P6 360 aa11.08□□□□□ -0.64
SMN1-202ENST00000380707 SH3D21A4FU49 640 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 PATE4P0C8F1 98 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 OR8G3PP0DMU2 310 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 PPP3CBP16298 524 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 NPR2P20594 1047 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 CENPAP49450 140 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 AQP4P55087 323 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 CDC42P60953 191 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 TUBA1BP68363 451 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 TUBA4AP68366 448 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 GLO1Q04760 184 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 NRN1LQ496H8 165 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 SP5Q6BEB4 398 aaPredicted RBP11.07□□□□□ -0.64
SMN1-202ENST00000380707 ALKBH2Q6NS38 261 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 UGT2A3Q6UWM9 527 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 TUBA1AQ71U36 451 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 CXXC5Q7LFL8 322 aaKnown RBP11.07□□□□□ -0.64
SMN1-202ENST00000380707 P2RY8Q86VZ1 359 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 LRRC18Q8N456 261 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 FGFBP3Q8TAT2 258 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 TMEM163Q8TC26 289 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 CYGBQ8WWM9 190 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
SMN1-202ENST00000380707 OR51V1Q9H2C8 321 aa11.07□□□□□ -0.64
SMN1-202ENST00000380707 EMC7Q9NPA0 242 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms