RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 KCTD18Q6PI47 426 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 NOXA1Q86UR1 476 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF679Q8IYX0 411 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 C15orf40Q8WUR7 153 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 NXPE2Q96DL1 559 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 ZFP3Q96NJ6 502 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 OR11A1Q9GZK7 315 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 TP63Q9H3D4 680 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 KCNG2Q9UJ96 466 aa19.36■□□□□ 0.69
TRIM54-202ENST00000380075 COL27A1Q8IZC6 1860 aaPredicted RBP19.36■□□□□ 0.69
TRIM54-202ENST00000380075 GPR171O14626 319 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 ZFAND5O76080 213 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 DAP3P51398 398 aaKnown RBP19.35■□□□□ 0.69
TRIM54-202ENST00000380075 MRPS10P82664 201 aaKnown RBP19.35■□□□□ 0.69
TRIM54-202ENST00000380075 IFITM2Q01629 132 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 PUDPQ08623 228 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 SLC17A1Q14916 467 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 DNM1P34Q6PK57 102 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 TMEM205Q6UW68 189 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 TMPRSS7Q7RTY8 843 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 LIX1LQ8IVB5 337 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 AKAP1Q92667 903 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRIM54-202ENST00000380075 DDIT4LQ96D03 193 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 LIN7BQ9HAP6 207 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 PLEKHA1Q9HB21 404 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 SLCO1C1Q9NYB5 712 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 MRPS7Q9Y2R9 242 aaKnown RBP19.35■□□□□ 0.69
TRIM54-202ENST00000380075 CCKBRP32239 447 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 DGCR2P98153 550 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 GLO1Q04760 184 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 FOXC1Q12948 553 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 RNF128Q8TEB7 428 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 DMRTB1Q96MA1 342 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 SPSB2Q99619 263 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 SDHAF3Q9NRP4 125 aa19.35■□□□□ 0.69
TRIM54-202ENST00000380075 IGLV3-32A0A0A0MS00 114 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 TMEM200CA6NKL6 621 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 CD3GP09693 182 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 MNDAP41218 407 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 RAG2P55895 527 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 FOXL2P58012 376 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 CD83Q01151 205 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 TEX30Q5JUR7 227 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 C16orf47Q6ZP98 133 aaPredicted RBP19.34■□□□□ 0.69
TRIM54-202ENST00000380075 H1FNTQ75WM6 255 aaPredicted RBP19.34■□□□□ 0.69
TRIM54-202ENST00000380075 LRRTM1Q86UE6 522 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 CDH24Q86UP0 819 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 SLC25A38Q96DW6 304 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 S100A16Q96FQ6 103 aaKnown RBP19.34■□□□□ 0.69
TRIM54-202ENST00000380075 RNF170Q96K19 258 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 CRB3Q9BUF7 120 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 POTEKPQ9BYX7 375 aa19.34■□□□□ 0.69
TRIM54-202ENST00000380075 ZNF354AO60765 605 aaPredicted RBP19.33■□□□□ 0.69
TRIM54-202ENST00000380075 CFPP27918 469 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 TRA2AQ13595 282 aaKnown RBP eCLIP19.33■□□□□ 0.69
TRIM54-202ENST00000380075 MEP1BQ16820 701 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 SLC25A53Q5H9E4 307 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 SIAH3Q8IW03 269 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 SLC22A8Q8TCC7 542 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 DNAJA3Q96EY1 480 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 FYTTD1Q96QD9 318 aaKnown RBP19.33■□□□□ 0.69
TRIM54-202ENST00000380075 ELOVL3Q9HB03 270 aa19.33■□□□□ 0.69
TRIM54-202ENST00000380075 MRPL22Q9NWU5 206 aaKnown RBP19.33■□□□□ 0.69
TRIM54-202ENST00000380075 TRABD2BA6NFA1 517 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 ECDO95905 644 aaPredicted RBP19.33■□□□□ 0.68
TRIM54-202ENST00000380075 CTLA4P16410 223 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 ERP29P30040 261 aaKnown RBP19.33■□□□□ 0.68
TRIM54-202ENST00000380075 SOX2P48431 317 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 CDK10Q15131 360 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 FCRLAQ7L513 359 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 PRSS35Q8N3Z0 413 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 THAP3Q8WTV1 239 aaPredicted RBP19.33■□□□□ 0.68
TRIM54-202ENST00000380075 ORAI1Q96D31 301 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 MRGPRX4Q96LA9 322 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 NIPAL2Q9H841 368 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 FANCFQ9NPI8 374 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 ASPMQ8IZT6 3477 aa19.33■□□□□ 0.68
TRIM54-202ENST00000380075 C7orf66A4D0T2 115 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ANXA2P2A6NMY6 339 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 GABARAPH6UMI1 98 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 GPANK1O95872 356 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ANXA2P07355 339 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 MAGEB1P43366 347 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 KIR3DL2P43630 455 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 SRP9P49458 86 aaKnown RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 AP3S2P59780 193 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ADAM8P78325 824 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 KLF9Q13886 244 aaPredicted RBP19.32■□□□□ 0.68
TRIM54-202ENST00000380075 WDR38Q5JTN6 314 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ESPNLQ6ZVH7 1005 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 ASB10Q8WXI3 467 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 MCHR2Q969V1 340 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 TMEM106AQ96A25 262 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 MIB2Q96AX9 1013 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 C8orf44Q96CB5 159 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 HAVCR1Q96D42 359 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 AMELYQ99218 206 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 STRADBQ9C0K7 418 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 KLRF1Q9NZS2 232 aa19.32■□□□□ 0.68
TRIM54-202ENST00000380075 PPP4R1LQ9P1A2 415 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms