RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 OR6V1Q8N148 313 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 IQCF1Q8N6M8 205 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 SDR9C7Q8NEX9 313 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 ZNF75AQ96N20 296 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 TSSK2Q96PF2 358 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 HS3ST6Q96QI5 342 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 SH3GL3Q99963 347 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 RBM4BQ9BQ04 359 aaKnown RBP16.34■□□□□ 0.21
SSU72-203ENST00000378725 RBM4Q9BWF3 364 aaKnown RBP16.34■□□□□ 0.21
SSU72-203ENST00000378725 SLC25A19Q9HC21 320 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 CMC2Q9NRP2 79 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 B9D1Q9UPM9 204 aa16.34■□□□□ 0.21
SSU72-203ENST00000378725 ANKHD1Q8IWZ3 2542 aaKnown RBP16.33■□□□□ 0.2
SSU72-203ENST00000378725 IGLV1-36A0A0B4J1U3 117 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 DCTN6O00399 190 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 UBL3O95164 117 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 SCG5P05408 212 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 PTAFRP25105 342 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 CD40P25942 277 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 LAP3P28838 519 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 ARR3P36575 388 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 GUCA1AP43080 201 aaPredicted RBP16.33■□□□□ 0.2
SSU72-203ENST00000378725 BSPH1Q075Z2 132 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 SGCAQ16586 387 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 DNM1P34Q6PK57 102 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 TMEM108Q6UXF1 575 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 MDP1Q86V88 176 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 GLB1L2Q8IW92 636 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 SLC37A3Q8NCC5 494 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 FGFBP3Q8TAT2 258 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 NANOS1Q8WY41 292 aaKnown RBP16.33■□□□□ 0.2
SSU72-203ENST00000378725 HTRA1Q92743 480 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 CIB1Q99828 191 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 RACGAP1Q9H0H5 632 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 CLEC4MQ9H2X3 399 aaPredicted RBP16.33■□□□□ 0.2
SSU72-203ENST00000378725 SEC61A2Q9H9S3 476 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 SRA1Q9HD15 236 aaKnown RBP16.33■□□□□ 0.2
SSU72-203ENST00000378725 POLE4Q9NR33 117 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 USE1Q9NZ43 259 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 COA3Q9Y2R0 106 aaPredicted RBP16.33■□□□□ 0.2
SSU72-203ENST00000378725 FKBP7Q9Y680 259 aa16.33■□□□□ 0.2
SSU72-203ENST00000378725 IGHV1-18A0A0C4DH31 117 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 A0A1W2PPR1 153 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 M0R1B8 84 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 BAG2O95816 211 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 IFNGP01579 166 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 HMGN1P05114 100 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 ALPLP05186 524 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 CD79AP11912 226 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 IGFBP5P24593 272 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 CAPZA2P47755 286 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 KRTAP10-9P60411 292 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 RAB1AP62820 205 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 ELF3P78545 371 aaPredicted RBP16.32■□□□□ 0.2
SSU72-203ENST00000378725 PIGFQ07326 219 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 PTGES3Q15185 160 aaKnown RBP16.32■□□□□ 0.2
SSU72-203ENST00000378725 KCNMB1Q16558 191 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 GSG1Q2KHT4 349 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 SLC16A14Q7RTX9 510 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 TMEM200AQ86VY9 491 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 CDC20BQ86Y33 519 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 SLC38A2Q96QD8 506 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 NMNAT2Q9BZQ4 307 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 NOX3Q9HBY0 568 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 RPRD1BQ9NQG5 326 aaKnown RBP16.32■□□□□ 0.2
SSU72-203ENST00000378725 PKDREJQ9NTG1 2253 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 ENOPH1Q9UHY7 261 aa16.32■□□□□ 0.2
SSU72-203ENST00000378725 A0A1W2PPL8 197 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 CD3EP07766 207 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 CST2P09228 141 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 MMP7P09237 267 aaPredicted RBP16.31■□□□□ 0.2
SSU72-203ENST00000378725 PATE4P0C8F1 98 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 MSR1P21757 451 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 SLC25A1P53007 311 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 DAG1Q14118 895 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 CRMP1Q14194 572 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 SLC36A2Q495M3 483 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 TMEM236Q5W0B7 351 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 FBXW10Q5XX13 1052 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 LRRC18Q8N456 261 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 CYB561A3Q8NBI2 242 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 FBXO17Q96EF6 278 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 RADILQ96JH8 1075 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 WACQ9BTA9 647 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 C9orf16Q9BUW7 83 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 PLEKHF2Q9H8W4 249 aa16.31■□□□□ 0.2
SSU72-203ENST00000378725 RIIAD1A6NNX1 92 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 ZAR1LA6NP61 321 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 SURF4O15260 269 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 PLAUP00749 431 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 ANPEPP15144 967 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 ZNF14P17017 642 aaPredicted RBP16.3■□□□□ 0.2
SSU72-203ENST00000378725 ZNF3P17036 446 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 PTDSS1P48651 473 aaKnown RBP16.3■□□□□ 0.2
SSU72-203ENST00000378725 ALDH3A2P51648 485 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 LSM6P62312 80 aaKnown RBP16.3■□□□□ 0.2
SSU72-203ENST00000378725 ENDOGQ14249 297 aaKnown RBP16.3■□□□□ 0.2
SSU72-203ENST00000378725 ADAM5Q6NVV9 412 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 SYT9Q86SS6 491 aa16.3■□□□□ 0.2
SSU72-203ENST00000378725 CBR4Q8N4T8 237 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms