RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PCNPQ8WW12 178 aaKnown RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 PIGCQ92535 297 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 DOK1Q99704 481 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 ANKRD10Q9NXR5 420 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 ZNF223Q9UK11 482 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 CD300LBA8K4G0 201 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 PRSS23O95084 383 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 P2RX1P51575 399 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 TAS2R30P59541 319 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 C10orf111Q8N326 155 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 OR13C9Q8NGT0 318 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 GOT1L1Q8NHS2 421 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 SORCS2Q96PQ0 1159 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 CFHR5Q9BXR6 569 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 CCL27Q9Y4X3 112 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 CABIN1Q9Y6J0 2220 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 A0A087WV62 115 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 ARRDC5A6NEK1 342 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 TOR1AO14656 332 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 WISP3O95389 354 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 UBE2KP61086 200 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 MEP1BQ16820 701 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 Q499Y3 187 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 RNF165Q6ZSG1 346 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 PHYHIPQ92561 330 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 ARPC5LQ9BPX5 153 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 GSX2Q9BZM3 304 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 POMT2Q9UKY4 750 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 SEC16AO15027 2179 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 GPR171O14626 319 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 ADAM10O14672 748 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 SULT1B1O43704 296 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 MSR1P21757 451 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 GABRR1P24046 479 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 HCCSP53701 268 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 H1FNTQ75WM6 255 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 COX15Q7KZN9 410 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 BCORP1Q8N888 145 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 C16orf52Q8NHV5 167 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 TSLPQ969D9 159 aa13.75□□□□□ -0.21
NPHP4-201ENST00000378156 NOSIPQ9Y314 301 aaKnown RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 TMEM184BQ9Y519 407 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 PCYT1BQ9Y5K3 369 aaPredicted RBP13.75□□□□□ -0.21
NPHP4-201ENST00000378156 SELENOFO60613 162 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 HBE1P02100 147 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 ELK1P19419 428 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 ENPP1P22413 925 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SRP9P49458 86 aaKnown RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 TAS2R46P59540 309 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 PLCXD3Q63HM9 321 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 MRPL41Q8IXM3 137 aaKnown RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 ST7LQ8TDW4 575 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SLC25A43Q8WUT9 341 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SGCZQ96LD1 299 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 TWSG1Q9GZX9 223 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SLAMF7Q9NQ25 335 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 K7EPK0 472 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 CLDN6P56747 220 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 MFAP5Q13361 173 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 TMEM41BQ5BJD5 291 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 FAM71E2Q8N5Q1 922 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SMCO4Q9NRQ5 59 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 DNAJB11Q9UBS4 358 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 TP53TG5Q9Y2B4 290 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 CHST2Q9Y4C5 530 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 KCNE3Q9Y6H6 103 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 COL11A1P12107 1806 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 GLCEO94923 617 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 C1QBP02746 253 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 PPT1P50897 306 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 IDO2Q6ZQW0 420 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 PRSS45Q7RTY3 260 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 CD163Q86VB7 1156 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 KDM8Q8N371 416 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 TP53I13Q8NBR0 393 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 NEURL2Q9BR09 285 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 PLSCR5A0PG75 271 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 DOK2O60496 412 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SERPINA7P05543 415 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 ABOP16442 354 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 PLA2G7Q13093 441 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 GLYR1Q49A26 553 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 SLC35D3Q5M8T2 416 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 VASH1Q7L8A9 365 aaPredicted RBP13.74□□□□□ -0.21
NPHP4-201ENST00000378156 TRAPPC6BQ86SZ2 158 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 LINC00346Q8IVM7 164 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 LURAP1Q96LR2 239 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 PLA2G12AQ9BZM1 189 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 FBXL2Q9UKC9 423 aa13.74□□□□□ -0.21
NPHP4-201ENST00000378156 KLRC4-KLRK1H3BQV0 150 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
NPHP4-201ENST00000378156 ASAH1Q13510 395 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 HTR4Q13639 388 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 MOB3CQ70IA8 216 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 TMEM178AQ8NBL3 297 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SCARB1Q8WTV0 552 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 ZNF681Q96N22 645 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 GPATCH2Q9NW75 528 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SH3BGRL2Q9UJC5 107 aa13.73□□□□□ -0.21
NPHP4-201ENST00000378156 SIPA1L1O43166 1804 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms