RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NSMAFQ92636 917 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 MRPL24Q96A35 216 aaKnown RBP14.52□□□□□ -0.09
HMGN4-201ENST00000377575 MCUR1Q96AQ8 359 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 NMD3Q96D46 503 aaKnown RBP14.52□□□□□ -0.09
HMGN4-201ENST00000377575 FAM46AQ96IP4 442 aaKnown RBP14.52□□□□□ -0.09
HMGN4-201ENST00000377575 C7orf34Q96L11 122 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 TNFRSF13CQ96RJ3 184 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 CDRT15Q96T59 188 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 PIMREGQ9BSJ6 248 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 LRMDAQ9H2I8 198 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 SIAEQ9HAT2 523 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 CCNB1IP1Q9NPC3 277 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 CD300AQ9UGN4 299 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 ZNF346Q9UL40 294 aaKnown RBP14.52□□□□□ -0.09
HMGN4-201ENST00000377575 V9GYQ6 96 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 NDUFS8O00217 210 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 GPRIN2O60269 458 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 LY6HO94772 140 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 CD14P08571 375 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 PCSK6P29122 969 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 EVX1P49640 407 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 SMIM11AP58511 58 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 HSF2Q03933 536 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 KRTAP1-1Q07627 177 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 SLC25A47Q6Q0C1 308 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 PYURFQ96I23 114 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 DHRS1Q96LJ7 313 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 CCT8L2Q96SF2 557 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 DOK1Q99704 481 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 CDH20Q9HBT6 801 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 GRHPRQ9UBQ7 328 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 AURKCQ9UQB9 309 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 UGT2A1Q9Y4X1 527 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 ABCA1O95477 2261 aa14.51□□□□□ -0.09
HMGN4-201ENST00000377575 IGKV1D-43A0A0B4J1Z2 117 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 XKRYO14609 159 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 SNAP29O95721 258 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 FAM107AO95990 144 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 SEMG1P04279 462 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 CDAP32320 146 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 APLNRP35414 380 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 ERVK-25P63136 954 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 SPIBQ01892 262 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 LOXL1Q08397 574 aaPredicted RBP14.5□□□□□ -0.09
HMGN4-201ENST00000377575 ARIH2OSQ8N7S6 290 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 NEU4Q8WWR8 484 aaPredicted RBP14.5□□□□□ -0.09
HMGN4-201ENST00000377575 NABP1Q96AH0 204 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 ZNF570Q96NI8 536 aa14.5□□□□□ -0.09
HMGN4-201ENST00000377575 MRPL37Q9BZE1 423 aaKnown RBP14.5□□□□□ -0.09
HMGN4-201ENST00000377575 YLPM1P49750 1951 aaKnown RBP14.49□□□□□ -0.09
HMGN4-201ENST00000377575 A0A096LNT2 108 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 TRBV4-1A0A0J9YWV2 114 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 LOC390937A0A1W2PQ73 354 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 TMEM129A0AVI4 362 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 INAFM1C9JVW0 142 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 M0R233 179 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 SYNGR3O43761 229 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 AHCYL1O43865 530 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 CD5LO43866 347 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 DIRAS1O95057 198 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 NDUFB2O95178 105 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 GADD45GO95257 159 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 FABP3P05413 133 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 MMP7P09237 267 aaPredicted RBP14.49□□□□□ -0.09
HMGN4-201ENST00000377575 OMPP47874 163 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 LIMS1P48059 325 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 CARTPTQ16568 116 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 SGCAQ16586 387 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 RGS7BPQ6MZT1 257 aaPredicted RBP14.49□□□□□ -0.09
HMGN4-201ENST00000377575 FITM2Q8N6M3 262 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 CLDN22Q8N7P3 220 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 CCDC197Q8NCU1 140 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 OR52J3Q8NH60 311 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 RSRC1Q96IZ7 334 aaKnown RBP14.49□□□□□ -0.09
HMGN4-201ENST00000377575 OCEL1Q9H607 264 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 SIGLEC7Q9Y286 467 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 ADAM18Q9Y3Q7 739 aa14.49□□□□□ -0.09
HMGN4-201ENST00000377575 A0A1W2PPL8 197 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 SH3PXD2BA1X283 911 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 TLX2O43763 284 aaPredicted RBP14.48□□□□□ -0.09
HMGN4-201ENST00000377575 ADRA2AP08913 450 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 ZNF32P17041 273 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 MSX2P35548 267 aaPredicted RBP14.48□□□□□ -0.09
HMGN4-201ENST00000377575 SELENOVP59797 346 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 PCBD1P61457 104 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 SEC23BQ15437 767 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 PABPC1L2AQ5JQF8 200 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 FAM27BQ5VT28 67 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 GPR139Q6DWJ6 353 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 ARHGAP24Q8N264 748 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 GPX7Q96SL4 187 aaPredicted RBP14.48□□□□□ -0.09
HMGN4-201ENST00000377575 SYT3Q9BQG1 590 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 BCL2L14Q9BZR8 327 aa14.48□□□□□ -0.09
HMGN4-201ENST00000377575 A0A1W2PPW3 197 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 UNC119BA6NIH7 251 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 H7C1C5 153 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 CST2P09228 141 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 FAM157BP0CG42 384 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 CCL2P13500 99 aa14.47□□□□□ -0.09
HMGN4-201ENST00000377575 ZNF26P17031 533 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms