RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 RND1Q92730 232 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 HTRA1Q92743 480 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 STARD4Q96DR4 205 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 LGALS12Q96DT0 336 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 COPS4Q9BT78 406 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 SFXN3Q9BWM7 321 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 YTHDF1Q9BYJ9 559 aaKnown RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 CCDC90BQ9GZT6 254 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 Q9UFV3 132 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 SELENOFO60613 162 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 SEC14L2O76054 403 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 BLVRAP53004 296 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 ADAM8P78325 824 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 HSF2Q03933 536 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 PIGFQ07326 219 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 ST3GAL4Q11206 333 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 RAB40BQ12829 278 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 POU4F2Q12837 409 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 TMED1Q13445 227 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 SGCAQ16586 387 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 MEP1BQ16820 701 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 ABHD12BQ7Z5M8 362 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 FJX1Q86VR8 437 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 GALNT11Q8NCW6 608 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 OR6N2Q8NGY6 317 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 SMAP2Q8WU79 429 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 SGCDQ92629 289 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 CNN2Q99439 309 aaKnown RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 OPN3Q9H1Y3 402 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 WDR76Q9H967 626 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 PAK1IP1Q9NWT1 392 aaPredicted RBP11.42□□□□□ -0.58
CBWD3-203ENST00000377344 HAO2Q9NYQ3 351 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 MALT1Q9UDY8 824 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 COMMD3-BMI1R4GMX3 469 aa11.42□□□□□ -0.58
CBWD3-203ENST00000377344 RP1L1Q8IWN7 2480 aaPredicted RBP11.41□□□□□ -0.58
CBWD3-203ENST00000377344 TFP02787 698 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 LYNP07948 512 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 SBK2P0C263 348 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF823P16415 610 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 GNLYP22749 145 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 OPRM1P35372 400 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 SLC15A1P46059 708 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF133P52736 654 aaPredicted RBP11.41□□□□□ -0.58
CBWD3-203ENST00000377344 CDH15P55291 814 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 ATCAYQ86WG3 371 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF843Q8N446 348 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 SLC26A10Q8NG04 563 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 OR10H4Q8NGA5 316 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 OR10H5Q8NGA6 315 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 IPCEF1Q8WWN9 437 aaPredicted RBP11.41□□□□□ -0.58
CBWD3-203ENST00000377344 MYDGFQ969H8 173 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 DMRTA2Q96SC8 542 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 INTS14Q96SY0 518 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 TBX5Q99593 518 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 CDADC1Q9BWV3 514 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 ADGRL4Q9HBW9 690 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 CNOT2Q9NZN8 540 aaKnown RBP11.41□□□□□ -0.58
CBWD3-203ENST00000377344 ERVK-18Q9QC07 812 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 POLR1DQ9Y2S0 133 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 UGT2A1Q9Y4X1 527 aa11.41□□□□□ -0.58
CBWD3-203ENST00000377344 IRGMA1A4Y4 181 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 EEF1E1-BLOC1S5C9J1V9 151 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 EEF1E1O43324 174 aaKnown RBP11.4□□□□□ -0.58
CBWD3-203ENST00000377344 RGS10O43665 173 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 SPARCP09486 303 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 PIPP12273 146 aaPredicted RBP11.4□□□□□ -0.58
CBWD3-203ENST00000377344 B4GALT1P15291 398 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 RPS27P42677 84 aaKnown RBP11.4□□□□□ -0.58
CBWD3-203ENST00000377344 UQCRFS1P47985 274 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 FOXG1P55316 489 aaPredicted RBP11.4□□□□□ -0.58
CBWD3-203ENST00000377344 GABARAPL2P60520 117 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 SLC35A2P78381 396 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 MVKQ03426 396 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 GGTLC2Q14390 218 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 KCTD21Q4G0X4 260 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 LUZP2Q86TE4 346 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF610Q8N9Z0 462 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 OR52I1Q8NGK6 324 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 C11orf40Q8WZ69 217 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 PHF3Q92576 2039 aaKnown RBP11.4□□□□□ -0.58
CBWD3-203ENST00000377344 TMEM80Q96HE8 168 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 FOXB1Q99853 325 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 DUSP21Q9H596 190 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 EMC7Q9NPA0 242 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 CCNB1IP1Q9NPC3 277 aa11.4□□□□□ -0.58
CBWD3-203ENST00000377344 MRPL22Q9NWU5 206 aaKnown RBP11.4□□□□□ -0.58
CBWD3-203ENST00000377344 ZNF99A8MXY4 864 aaPredicted RBP11.39□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF593O00488 134 aaPredicted RBP11.39□□□□□ -0.59
CBWD3-203ENST00000377344 DVL2O14641 736 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 LRRTM2O43300 516 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 RAB36O95755 333 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 CGAP01215 116 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 SCG5P05408 212 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 GAAP10253 952 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 MSR1P21757 451 aa11.39□□□□□ -0.59
CBWD3-203ENST00000377344 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
CBWD3-203ENST00000377344 HCCSP53701 268 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms