RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ATP6V1E1P36543 226 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 DBPQ10586 325 aaPredicted RBP20.2■□□□□ 0.82
HLA-C-202ENST00000376237 RAB40BQ12829 278 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 IGFBP7Q16270 282 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 NRN1LQ496H8 165 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 MTFR2Q6P444 385 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 BEND4Q6ZU67 534 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 FOXL2NBQ6ZUU3 175 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 LINGO2Q7L985 606 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF540Q8NDQ6 660 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 IPCEF1Q8WWN9 437 aaPredicted RBP20.2■□□□□ 0.82
HLA-C-202ENST00000376237 MARCH7Q9H992 704 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 UGT2A1Q9Y4X1 527 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 PCDHGB1Q9Y5G3 927 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 RP1L1Q8IWN7 2480 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF99A8MXY4 864 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-202ENST00000376237 MSTNO14793 375 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 SMNDC1O75940 238 aaKnown RBP eCLIP20.19■□□□□ 0.82
HLA-C-202ENST00000376237 C1QL1O75973 258 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 TNFAIP8O95379 198 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 NPR2P20594 1047 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 MPGP29372 298 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 SH3BGRP55822 239 aaPredicted RBP20.19■□□□□ 0.82
HLA-C-202ENST00000376237 MRPS34P82930 218 aaKnown RBP20.19■□□□□ 0.82
HLA-C-202ENST00000376237 SLC26A10Q8NG04 563 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 SEC61A2Q9H9S3 476 aa20.19■□□□□ 0.82
HLA-C-202ENST00000376237 PHF3Q92576 2039 aaKnown RBP20.19■□□□□ 0.82
HLA-C-202ENST00000376237 KALRNO60229 2985 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 A0A1W2PPL8 197 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 FADS2O95864 444 aaKnown RBP20.18■□□□□ 0.82
HLA-C-202ENST00000376237 GAAP10253 952 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 GNLYP22749 145 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 KCNMB1Q16558 191 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 B3GLCTQ6Y288 498 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF627Q7L945 461 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF610Q8N9Z0 462 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF511Q8NB15 262 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 PRR7Q8TB68 274 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 GGHQ92820 318 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF837Q96EG3 531 aaPredicted RBP20.18■□□□□ 0.82
HLA-C-202ENST00000376237 CNN2Q99439 309 aaKnown RBP20.18■□□□□ 0.82
HLA-C-202ENST00000376237 FOXB1Q99853 325 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 NELFAQ9H3P2 528 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 DUSP21Q9H596 190 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 CCNB1IP1Q9NPC3 277 aa20.18■□□□□ 0.82
HLA-C-202ENST00000376237 EXOGQ9Y2C4 368 aaKnown RBP20.18■□□□□ 0.82
HLA-C-202ENST00000376237 SBK2P0C263 348 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 ZNF823P16415 610 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 BMP5P22003 454 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 GABARAPL2P60520 117 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TGFBR3Q03167 851 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 KCTD21Q4G0X4 260 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 FJX1Q86VR8 437 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TIGD4Q8IY51 512 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 OR51G2Q8NGK0 314 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 MYDGFQ969H8 173 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 LGALS12Q96DT0 336 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 INTS14Q96SY0 518 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 SIAEQ9HAT2 523 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 POLE4Q9NR33 117 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TMEM38BQ9NVV0 291 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 FKBP14Q9NWM8 211 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TAS2R16Q9NYV7 291 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 KCNG2Q9UJ96 466 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 ZFYVE26Q68DK2 2539 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 PTGES3LE9PB15 166 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TMCC2O75069 709 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TFP02787 698 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 MSR1P21757 451 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 LSM6P62312 80 aaKnown RBP20.17■□□□□ 0.82
HLA-C-202ENST00000376237 SLC35A2P78381 396 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 P2RY6Q15077 328 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 C4orf17Q53FE4 359 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 NCCRP1Q6ZVX7 275 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-202ENST00000376237 SLC16A9Q7RTY1 509 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 MRGPRGQ86SM5 289 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 OR10H5Q8NGA6 315 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 MNTQ99583 582 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 COPS4Q9BT78 406 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 OPN3Q9H1Y3 402 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-202ENST00000376237 ADGRL4Q9HBW9 690 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 FGF20Q9NP95 211 aaPredicted RBP20.17■□□□□ 0.82
HLA-C-202ENST00000376237 MRPL22Q9NWU5 206 aaKnown RBP20.17■□□□□ 0.82
HLA-C-202ENST00000376237 COQ3Q9NZJ6 369 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 COMMD3-BMI1R4GMX3 469 aa20.17■□□□□ 0.82
HLA-C-202ENST00000376237 TVP23AA6NH52 213 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 A8MXE2 369 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 LRRTM2O43300 516 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 EEF1B2P24534 225 aaKnown RBP20.16■□□□□ 0.82
HLA-C-202ENST00000376237 DCKP27707 260 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 CDAP32320 146 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 ST3GAL4Q11206 333 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 TEX30Q5JUR7 227 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 FAM27BQ5VT28 67 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 AHSA2Q719I0 299 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 ERI1Q8IV48 349 aaKnown RBP20.16■□□□□ 0.82
HLA-C-202ENST00000376237 GABRG1Q8N1C3 465 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 C11orf40Q8WZ69 217 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 FOXN4Q96NZ1 517 aa20.16■□□□□ 0.82
HLA-C-202ENST00000376237 YIPF3Q9GZM5 350 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms