RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 C20orf196Q8IYI0 205 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 WACQ9BTA9 647 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 GP6Q9HCN6 339 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 KLHDC2Q9Y2U9 406 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 A0A0C4DFX4 3053 aa9.89□□□□□ -0.83
PDPN-202ENST00000376057 TRAV1-2A0A0B4J238 106 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 TRAV17A0A0B4J275 112 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 A0A1B0GVC2 190 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 NPIPA2E9PIF3 369 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 NPIPA3F8WFD2 350 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 EFSO43281 561 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 RPS3AP61247 264 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 PPIAP62937 165 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 SLC10A1Q14973 349 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 TOMM20Q15388 145 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ZNF829Q3KNS6 432 aaPredicted RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 TP53I3Q53FA7 332 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 YIF1BQ5BJH7 314 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 GALNTL5Q7Z4T8 443 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 MEIOBQ8N635 442 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 FDCSPQ8NFU4 85 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 OR6N2Q8NGY6 317 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 OR10D3Q8NH80 312 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ABHD4Q8TB40 342 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 RNF128Q8TEB7 428 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 DNAJA3Q96EY1 480 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 SH3GL3Q99963 347 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 GLTPQ9NZD2 209 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 CYB5R1Q9UHQ9 305 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 GNG8Q9UK08 70 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 PRR32B1ATL7 298 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 EIF1AYO14602 144 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 RAMP1O60894 148 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ZNF823P16415 610 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 RPS19P39019 145 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 RASGEF1BQ0VAM2 473 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 RIPPLY2Q5TAB7 128 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 LYPD4Q6UWN0 246 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 DPY19L4Q7Z388 723 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 GHDCQ8N2G8 530 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 NEIL3Q8TAT5 605 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ST7LQ8TDW4 575 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 MCHR2Q969V1 340 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 TM9SF2Q99805 663 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 HES7Q9BYE0 225 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 AKIP1Q9NQ31 210 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 CRNNQ9UBG3 495 aaPredicted RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 MSRB2Q9Y3D2 182 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 UGT2A1Q9Y4X1 527 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 PEX16Q9Y5Y5 336 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 TVP23AA6NH52 213 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ZNF724A8MTY0 619 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 FAM171A2A8MVW0 826 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 SRSF10O75494 262 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 PRKAR1AP10644 381 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 MAGEA5P43359 124 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ADAM8P78325 824 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 PLGLB1Q02325 96 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 SRSF6Q13247 344 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 NRN1LQ496H8 165 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 OR52N5Q8NH56 324 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 GHSRQ92847 366 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 MAP6Q96JE9 813 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 WDR12Q9GZL7 423 aaKnown RBP9.88□□□□□ -0.83
PDPN-202ENST00000376057 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.88□□□□□ -0.83
PDPN-202ENST00000376057 ZCCHC4Q9H5U6 513 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 PLGRKTQ9HBL7 147 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 ACOXLQ9NUZ1 547 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 KLK13Q9UKR3 277 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 FLVCR1Q9Y5Y0 555 aa9.88□□□□□ -0.83
PDPN-202ENST00000376057 OR6C65A6NJZ3 312 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 GPR171O14626 319 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 OPN1LWP04000 364 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 TGFBR1P36897 503 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 GDI2P50395 445 aaKnown RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 CCL11P51671 97 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 CLDN17P56750 224 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 RPS11P62280 158 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDPN-202ENST00000376057 ALKBH1Q13686 389 aaKnown RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 ETFDHQ16134 617 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 SOWAHCQ53LP3 525 aaPredicted RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 LRFN4Q6PJG9 635 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 GPAT4Q86UL3 456 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 MCFD2Q8NI22 146 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 SMAP2Q8WU79 429 aaPredicted RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 RNF133Q8WVZ7 376 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 ABTB1Q969K4 478 aaPredicted RBP9.87□□□□□ -0.83
PDPN-202ENST00000376057 LINC00470Q9BZP3 86 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 RNF167Q9H6Y7 350 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 ZNF281Q9Y2X9 895 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 IGKV1D-43A0A0B4J1Z2 117 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 TMEM212A6NML5 194 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 TAF4O00268 1085 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 UCHL1P09936 223 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 PSKH1P11801 424 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 HIST2H3PS2Q5TEC6 136 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 LIPNQ5VXI9 398 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 C22orf42Q6IC83 251 aa9.87□□□□□ -0.83
PDPN-202ENST00000376057 ZNF544Q6NX49 715 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms